Protein Model on 8jkl_H_1_C_1 (TEMPLATE: 8jkl )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IRF5_HUMAN) H 1 (H) polymer(polypeptide(L)) [108 aa] Interferon regulatory factor 4 :F2Z3D5_HUMAN
2 b C 1 (E) polymer(polydeoxyribonucleotide) [19 base] GATA-Forward 47W 48R(K) 49H 50A 51T(G) 52R(K) 53H(Q) 55P(Y) 58D(E) 84A(P) 87K 91R 92C 95N 96K (identity: 53.3 %/45.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8jkl_H_1 identity=45.3%
queryA        16:RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPY: 115
                : *  **  *  *  **** * * **  * *** **         *   *****   **  ** *  **  **  ******** **             **:
8jkl_H_1       4:KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPY: 103
SecStr          : HHHHHHHHHHH  STT  BSSTTS EEEEE     SS TTSSTTHHHHHHHHHHTTSS BTTB   HHHHHHHHHHHHHH SSEEE TTT B SSSS E:    
ExpBur          :ebeebbbebbeeeebeebebebeeeeebebbbeebbeeeeeebebbebbebbbeeeeebeeeeeeeeeeebbeebeeebeebeebeebeeebeeeeeebb:    
Contact         :                               bbbbbbb b  b                         b  b   bb  bb                   

queryA       116:KIYEVC: 121
                :* *   :
8jkl_H_1     104:KVYRIV: 109
SecStr          :EEEEE :    
ExpBur          :bbbebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123