[pdbjlvh2]Protein Model on 5jem_G_1_F

Protein Model on 5jem_G_1_F_1 (TEMPLATE: 5jem )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IRF5_HUMAN)	G 1 (G)	polymer(polypeptide(L)) [200 aa]	Interferon regulatory factor 3 :IRF3_HUMAN
2	b		F 1 (F)	polymer(polypeptide(L)) [42 aa]	CREB-binding protein :CBP_HUMAN	303E(G) 304D(M) 306P(L) 307S(T) (identity: 0.0 %/34.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jem_G_1 identity=34.9%

queryA       249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWS: 347
                :  *    ****     *** * * **  *             *  *     * *     *     *    *  *  ** *   ** * * **  *   * :
5jem_G_1      18:EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW-: 108
SecStr          :EEEEEEEETTEEEEEEEEEESS EEEESS S---S TTSSSEEEE -----  GGGT   HHHHHHHHHHHHT TT EEEEEETTEEEEEE SSS EEE-:    
ExpBur          :ebbbbbbbebeebbeeebebeebbbbbeeee---eeeeeebebbeb-----eebeeebeeeebbeebeebbeebebbbbbeeeeeebebbbebebebeb-:    
Contact         :                                                      bb bb                                         

queryA       348:GPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS-GELSWSAD: 439
                :   *      **                 * *  *   ** *  *     *     ** ** **   *  * *  * ***   * * **   *  *    :
5jem_G_1     109:---AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASELEN: 204
SecStr          :---EEE SS     SS SEE  SSS EEEEEHHHHHHHHHHHHTT-       EEEEEESS   SSS GGG SEEEEEEEHHHHHHHHHHHHHT     T:    
ExpBur          :---bbbebeebeeeebeeeebeeeeebebbebeebeeebeebeee-eeebbebbbbbbbeeebbeeeebeebbbbbbbbbbebeeebeebeeeebeeeee:    

queryA       440:SIRLQISN: 447
                :   * * *:
5jem_G_1     205:TVDLHIEN: 212
SecStr          :T       :    
ExpBur          :eeeeeeee:

Protein Model on 5jem_G_1_F_1 (TEMPLATE: 5jem )

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