Protein Model on 8jko_G_1_E_1 (TEMPLATE: 8jko )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IRF5_HUMAN) G 1 (G) polymer(polypeptide(L)) [109 aa] Interferon regulatory factor 4 :F2Z3D5_HUMAN
2 b E 1 (E) polymer(polydeoxyribonucleotide) [19 base] GATA-Forward 47W 49H 50A 84A(P) 87K 91R 92C 95N (identity: 87.5 %/45.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8jko_G_1 identity=45.3%
queryA        16:RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPY: 115
                : *  **  *  *  **** * * **  * *** **         *   *****   **  ** *  **  **  ******** **             **:
8jko_G_1       4:KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPY: 103
SecStr          :HHHHHHHHHHHHT STT EESSTTS EEEEE   SSSTT  HHHHTHHHHHHHHHTTS  TTTS   HHHHHHHHHHHHHH SSEEE GGG   SSSS E:    
ExpBur          :ebeebbbebbeeeebeebebebeeeeebebebbeeeeeeeeeeebbebbebbbeeeeebeeeeeeeebebbeeebeeebeeeeebeebeeebeeeeeebe:    
Contact         :                               b bb                                 b  b   bb  b                    

queryA       116:KIYEVC: 121
                :* *   :
8jko_G_1     104:KVYRIV: 109
SecStr          :EEEEE :    
ExpBur          :bbbebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123