[pdbjlvh2]Protein Model on 5jer_F_1_E

Protein Model on 5jer_F_1_E_1 (TEMPLATE: 5jer )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:5]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IRF5_HUMAN)	F 1 (C)	polymer(polypeptide(L)) [234 aa]	Interferon regulatory factor 3 :IRF3_HUMAN
2	b		E 1 (A)	polymer(polypeptide(L)) [234 aa]	Interferon regulatory factor 3 :IRF3_HUMAN	270H(E) 294L 296Q(G) 447N 448P(S) 449D(H) (identity: 33.3 %/35.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jer_F_1 identity=35.2%

queryA       249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVF: 345
                :  *    ****     *** * * **  *            *   *    *  * *     *     *    *  *  ** *   ** * * **  *   :
5jer_F_1      18:EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTY: 107
SecStr          : EEEEEESSSSEEEEEEE  TT EEEE S  ----------  SSSSSEEEE       STTHHHHHHHHHHHHTTTT EEEEE SSEEEEEE SS  EE:    
ExpBur          :ebbbbbbbeeeeebeeebebeebbbbbeeee----------eeeeeebeebebeebeeeeeeeeebeebeebbeebeebbbbebeebebebbbebebebe:    
Contact         :                     b                       b bb                                                   

queryA       346:WSGPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS-GELSWS: 437
                :*    *      **                 * *  *   ** *  *     *     ** ** **   *  * *  * ***   * * **   *  *  :
5jer_F_1     108:W----AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSL: 202
SecStr          :E----EEE SS S  SS  SEEE SSS EEEEEHHHHHHHHHHHHTT-SS     EEEEEESS   TTS GGGSSEEEEEEEHHHHHHHHHHHHHTS SS:    
ExpBur          :b----bbbeeeebbeeebeeeebeeeeeeebbbbbebbeebbebeee-eeeebebbbbbbbeeebbeeeebeebbbbbbbbbbbbebbbebbeebeeeee:    

queryA       438:ADSIRLQISNPDLKDRMVEQFK: 459
                :     * ***         * *:
5jer_F_1     203:ENTVDLHISNSHPLSLTSDQYK: 224
SecStr          : EEE   BTT   EEE HHHHH:    
ExpBur          :eeebebebeeeeebebbbeebe:    
Contact         :         bbb

Protein Model on 5jer_F_1_E_1 (TEMPLATE: 5jer )

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