[pdbjlvh2]Protein Model on 3a77_D_1_J

Protein Model on 3a77_D_1_J_1 (TEMPLATE: 3a77 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IRF5_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [230 aa]	Interferon regulatory factor 3 :IRF3_HUMAN
2	b		J 1 (D)	non-polymer(MPD)	(4S)-2-METHYL-2,4-PENTANEDIOL	270H(E) 289F(P) 326I(A) 328Q(W) 337I(Q) (identity: 0.0 %/35.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3a77_D_1 identity=35.0%

queryA       249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFW: 346
                :  *    ****     *** * * **             * * *  *     * *     *     *    *  *  ** *   ** * * **  *   *:
3a77_D_1      18:EFEVTAFYRGRQVFQQTISCPEGLRL----VGXXXXXXXLPGWPVTL-----PDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW: 108
SecStr          :EEEEEEEETTEEEEEEEEE TT EEE----E -------  SEEEE -----  GGGT   HHHHHHHHHHHHH TT EEEEEETTEEEEEE SSS EEE:    
ExpBur          :ebbbbbbbeeeebeeeebebeebbbb----be-------eebeebeb-----eebeeebeeeebbebbeebbebbeebbbbebeebebebebebebebbb:    
Contact         :                     b                  b                                      b b        b         

queryA       347:SGPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS-GELSWSA: 438
                :    *      **                 * *  *   ** *  *     *     ** ** **   *  * *  * ***   * * **   *  *   :
3a77_D_1     109:----AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASULE: 203
SecStr          :----EEE SS    TT  SEE  SSS EEEEEHHHHHHHHHHHHTT-SS     EEEEEE  S TT  TTTT  EEEEEEEHHHHHHHHHHHTTSSSSS :    
ExpBur          :----bbbeeeebeeeeeeeeebeeeeebebbebbebbeebbebeee-eeebbebbbbbbbbbeeeeeebbeebbbbbbbbbbbbebbbebbeebeeeeee:    

queryA       439:DSIRLQISNPDLKDRMVEQFK: 459
                :    * ***         * *:
3a77_D_1     204:NTVDLHISNSHPLULTSDQYK: 224
SecStr          :EEE   BTT   EEE HHHHH:    
ExpBur          :eebebebeeeeebebbbeebb:

Protein Model on 3a77_D_1_J_1 (TEMPLATE: 3a77 )

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