Protein Model on 1if1_D_1_B_1
(TEMPLATE: 
1if1
)Protein Model on 1if1_D_1_B_1
(TEMPLATE: 1if1
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IRF5_HUMAN) | D 1 (B) | polymer(polypeptide(L)) [104 aa] | PROTEIN (INTERFERON REGULATORY FACTOR 1) :IRF1_MOUSE | |
| 2 | b | B 1 (D) | polymer(polydeoxyribonucleotide) [26 base] | DNA (26-MER) | 20W 21L 47W 48R(K) 49H 50A 51T(A) 52R(K) 53H 67W 71T 73K(R) 84A(K) 87K 89N 91R 92C 95N 96K(S) 97S(L) 109D(N) (identity: 61.9 %/42.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1if1_D_1 identity=42.3% |
queryA 17:LKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYK: 116
: *** * ** * *** * * * * *** ** ** * * ** ** * * * ** **** *** * * * * :
1if1_D_1 8:MRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVR: 107
SecStr : THHHHHHHHSSSSS SSSSEE TTSTT TTTSSSHHHHHHHHTTS SS S HHHHHHHHHHHHHH SS EE SS SS E:
ExpBur :eeeebbebbeebbeeeeebeeeeeebbebebeeeeeeeeeeeebbebbeebbeebeebeeeeeeeebeebbeebeebbeebeebeeeeebeeeeebbbbb:
Contact : bb bbbbbbb b b b b b b bb bbb b
queryA 117:IYEV: 120
: * :
1if1_D_1 108:VYRM: 111
SecStr :E :
ExpBur :bbee:
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[assembly_id:1]
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