Protein Model on 5jem_C_1_D_1
(TEMPLATE: 
5jem
)Protein Model on 5jem_C_1_D_1
(TEMPLATE: 5jem
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IRF5_HUMAN) | C 1 (B) | polymer(polypeptide(L)) [203 aa] | Interferon regulatory factor 3 :IRF3_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [42 aa] | CREB-binding protein :CBP_HUMAN | 249D(E) 267S 376L(I) 379L 380I 383Q(T) 421V(T) 422A(C) 423A(L) 425L(A) 426L 428E 429M 430F(A) 432G 433E(G) 434L(A) (identity: 41.2 %/34.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5jem_C_1 identity=34.9% |
queryA 249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWS: 347
: * **** *** * * ** * * * * * * * * * ** * ** * * ** * * :
5jem_C_1 18:EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW-: 108
SecStr :EEEEEEEETTEEEEEEEEE TT EEEESS --- TTS SEEEE ----- GGGT HHHHHHHHHHHHTTTT EEEEEETTEEEEEE SSS EEE-:
ExpBur :ebbbbbbbeeeebbeeebebeebbbbbeeee---eeeeeebebbeb-----eebeeebeeeebbeebeebbeebebbbbbebeeeebebbbebebebeb-:
Contact :b b
queryA 348:GPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFS-GELSWSAD: 439
: * ** * * * ** * * * ** ** ** * * * * *** * * ** * * :
5jem_C_1 109:---AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASELEN: 204
SecStr :---EEE SS SSS SEE SSS EEEEEHHHHHHHHHHHHTT - EEEEEESS SSS GGGSS EEEEEEHHHHHHHHHHHHHT T:
ExpBur :---bbbebeebeeeebeeeebeeeeebebbebeebeeebeebeeeeeebbe-bbbbbbbeeebbeeeebeebbbbbbbbbbebeeebeebeeeebeeeee:
Contact : b bb b bbb bb bbb bbbb
queryA 440:SIRLQISN: 447
: * * *:
5jem_C_1 205:TVDLHIEN: 212
SecStr :T :
ExpBur :eeeeeeee:
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[assembly_id:1]
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