Protein Model on 1zoq_A_1_B_1
(TEMPLATE: 
1zoq
)Protein Model on 1zoq_A_1_B_1
(TEMPLATE: 1zoq
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IRF5_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [191 aa] | Interferon regulatory factor 3 :IRF3_HUMAN | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [47 aa] | CREB-binding protein :CBP_HUMAN | 249D(E) 267S 376L(I) 379L 380I 383Q(T) 421V(T) 422A(C) 423A(L) 425L(A) 426L 429M (identity: 41.7 %/35.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1zoq_A_1 identity=35.7% |
queryA 249:DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWS: 347
: * **** *** * * ** * * * * * * * * * ** * ** * * ** * * :
1zoq_A_1 8:EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW-: 98
SecStr :EEEEEEEETTEEEEEEEEEETT EEEE S --- TTS SEEEE ----- GGGT HHHHHHHHHHHHTTTT EEEEEETTEEEEEE SSS EEE-:
ExpBur :ebbbbbbbeeeebbeeebebeebbbbbbeee---eeeeeebeebeb-----bebeeebeeeebbeebeebbeebebbbbbeeeeeebebbbebebebeb-:
Contact :b b
queryA 348:GPCASAHDSCPNP-------IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEM: 429
: * ** * * * ** * * * ** ** ** * * * * *** * * **:
1zoq_A_1 99:---AVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEM: 183
SecStr :---EEE SS SEE SSS EEEEEHHHHHHHHHHHHHT - EEEEEESS SSS GGGSS EEEEEEHHHHHHHHH:
ExpBur :---bbbeeebeeeeebeeeebeeeeeeebbebeebeeebeebeeeeeeebe-bbbbbbbeeebbeeeebeebbbbbbbbbbebeeebee:
Contact : b bb b bbb bb b
|
[assembly_id:1]
[help]