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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | R 1 (R) | polymer(polypeptide(L)) [191 aa] | Integrin alpha-2 :ITA2_HUMAN | |
2 | b | CB 1 (R) | non-polymer(NA) | SODIUM ION | 164S 165M(N) 166S (identity: 66.7 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6ndd_R_1 identity=29.2% |
queryA 155:VDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSN--TSYQFAAVQFSTSYKTEFDFSDY-VKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGA: 251 : * * * * * * * * * * * * * * * ******** * * : 6ndd_R_1 24:IDVVVVCDESNSIYP--WDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVVFNLNTYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSAASGG: 121 SecStr :EEEEEEEE TT --THHHHHHHHHHHHTS BSTTSEEEEEEEESSSEEEEE TTS SSHHHHHHHHTT S HHHHHHHHHHHTTSTTTT : ExpBur :bbbbbbbbbbeebee--bebbeebbeebbeebebeeeebbbbbbbbbeeeeeebebeeeeeeeebbebbeebeeebbeebbbbebbeebbeebbeeebbe: Contact : bbb queryA 252:RPDATKVLIIITDGEATDSGNIDAAKD------IIRYIIGIGKHFQ-----TKESQETLHKFASKPASEF: 310 :* **** **** * * * * * * ** ** * : 6ndd_R_1 122:RRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERY: 191 SecStr : TTSEEEEEEEESS S GGGHHHHHHHHHHTT EEEEEEE HHHHHTT HHHHHHHHHHS SSHHHH: ExpBur :beebeebbbbbbbbebebeeeeeebbeebeeeebebbbbbbbbebeeeeeeeeebbebbeebbbeeeeeb: |