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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [924 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | T 1 (A) | non-polymer(MN) | MANGANESE (II) ION | 771C 774D 776K(V) 812E (identity: 75.0 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4mmy_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 4mmy_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :SS TTTTTTT TTSEEEE TTSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE SSSSS EEEEEET: ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeeeebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb: queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 4mmy_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :TTTTTT EEEEE ----SSS EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT EEE TTS EEE EEEEEEE SSS EEEEEEE SSTT--: ExpBur :ebeeebbbbbbbb----beebeeeeebebebeebebbbbbbebbbbeeeebbbb-bbbbebebebeeeeeeebbbbbbbbbeeebeeeeeebebeeee--: queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 4mmy_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr : TTSEEEEEE SS SSS EEEEEETT SGGG EEEEE EETTEE SS SEEE ------- SSS EEEEEEEEE SS SSS EEEEEETTTT: ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbbeeeebbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebeeebbebebbbbbbbbbbbb: queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 4mmy_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEEEE EEEEEEEEEEESSEE TT SSS EEEEEEEEEEEEESSS S----- B EEEEES TT SSS EEETTT SSEEEEE : ExpBur :ebbbbbbbbbbebeeebebeeeebebeeeeeeebeeeeebbbbebebbbebebeeebee-----ebebbbebbbbeeebeeeeebbbbbeeeeeeeeeeb: queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 4mmy_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr : B SSS EEEEEEEEE TTT SS EEEEEEE -------- SSSS EE SS SEEEEEEEE S-- TTTTS EEEEE - SS: ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebeb--------eeeeeeeeeebebebeeeeeeeeeeebbbeee--beeeeebebebebebe-bee: Contact : b b b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 4mmy_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr :SEEETTS EEEEEEEEEEE SS BTTEEEEEE TT EEEEE- SS SSS EEEEEETT---EEEEEEEEESSB- TT EEEEEEEEEE SS : ExpBur :eebebbeebebbbebebbbeeebbbebebbbebeebbebebb-beeeeebbeeeeeeeeeee---eeebbbebeeeb-eeeeeeebbbebbbeeeeeeee: Contact : b queryA 891:SVELHANVTCNN: 902 :** *: 4mmy_A_1 710:SVKFDLQIQSSN: 721 SecStr :EEEEEEEEE : ExpBur :ebebebbbebeb: |