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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [450 aa] | Integrin alpha-5 :ITA5_HUMAN | |
2 | b | L 1 (A) | non-polymer(CA) | CALCIUM ION | 468D 470D(N) 472D 474E(L) 476E(D) (identity: 40.0 %/34.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4wk4_A_1 identity=34.8% |
queryA 353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRA-------------GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLF: 436 :* ** * * * * * * * * * * **** * * * * * * * : 4wk4_A_1 167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYY-PEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTIL: 265 SecStr :TSEEEE TT EEEEETTHHHHTBEEEEE HHHHHTT -TTSSS TT EE GGG S BTSSEEEE SSSSS EEEEEETTTTTTT EEEEE: ExpBur :bebbbbbeebbbbbbbbbbbeebbbbbbbebeebbebee-eeebbbebeebeebeeeeeeeeebebbbbbbbbbbeeeeebbbbbbbbebeeeebbbbbb: queryA 437:QEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTD: 530 : * * * **** ** ** ** **** * *** * * * * **** * * *: 4wk4_A_1 266:N----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGD: 360 SecStr : ----TTT EEEEEE SSTTS TTSEEEEE SSSSS EEE-EEETT EEE TTS EEE BEEEEE B SS B SS SEEEE STT BTSEEEEEE : ExpBur :b----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebeeebeeeeebbbbebbbbbbeeebbeeeeebebebeeeebebbbbbbebeb: Contact : b b b b b queryA 531:INGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614 : ** *** *** ** * * * *** *** * ** * ** * * * ** * **: 4wk4_A_1 361:LDQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRP: 450 SecStr :TT SSS EEEEEETT STTSS EEEEE TTSS SS SEEE SS SS TTSSEEEEE SS SSS EEEEEEGGGTEEEEE : ExpBur :bbeeeeebbbbbbbebbeeebbbbbbbebbeebbeeeeebebebebeeeeeebebbebbbbbeebeeeeebbbbbbbbbebebbbbebee: |