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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [452 aa] | INTEGRIN ALPHA-IIB :ITA2B_HUMAN | |
2 | b | K 1 (A) | non-polymer(CA) | CALCIUM ION | 530D 532N(D) 534D 536L(Y) 538D (identity: 60.0 %/37.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2vdp_A_1 identity=37.7% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * * **** ** ** ** **** * * * : 2vdp_A_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS TTS EEEEEETTHHHHT EEEEE T-----T EEEEEE SSTTS TTSEEEEE SSSS EEE-EEETT- EEEETT: ExpBur :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbbe-----ebeeeeebebeeeebebbbbbbbbbbbeeeeebbb-bbbbe-beeeeee: queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** * : 2vdp_A_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415 SecStr :TEEEE EEEEE STT S SEE-EE STT-- TTSEEEEEE SS SSS EEEEEETT STTSSBEEEEE EETTEE SS SEEEE- S TT : ExpBur :eeebebbbbbbbbbeeeeeebeeeeee-bebeeee--bebbbbbbebbebeeeeeebbbbbbbebbeeeebbbbbbbbbeebbeeeeebebe-bebeeeb: Contact : b b b b b queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614 : ** * * * * * *** * * *: 2vdp_A_1 416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 452 SecStr : -BTSEEEEEE SSSSSS EEEEEEGGGTEEEEEEE : ExpBur :b-bbebbebeeebeeeeebbbbbbbeebbebbbbbbee: |