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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [452 aa] | INTEGRIN ALPHA-IIB :ITA2B_HUMAN | |
2 | b | F 1 (D) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 452H(R) 456I(M) (identity: 0.0 %/37.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2vdq_A_1 identity=37.7% |
queryA 396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491 : ** ** ** * * *** * * * * **** ** ** ** **** * * * : 2vdq_A_1 227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319 SecStr : GGGTT TTSEEEEE SS TTS EEEEEETTHHHHT EEEEE T-----T EEEEEE SSTTS TTSEEEEE SSSS EEE-EEETT- EEEETT: ExpBur :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbbe-----ebeeeeebebebeebebbbbbbbbbbbeeeeebbb-bbbbe-beeeeee: Contact : b b queryA 492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578 : *** ** * * * **** ** * * ** * ** ** * * * * ** *** * : 2vdq_A_1 320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415 SecStr :TEEEE EEEEE SSS S SEE-EE STT-- TTSEEEEEE TT SSS EEEEEETT STTSS EEEEE EETTEE SS SEEEE- S TT : ExpBur :eeebebbbbbbbbbeeeeeebeeeeee-bebeeee--bebbbbbbebbebeeeeeebbbbbbbebbeeeebbbbbbbbbeebbeeeeebebe-bebeeeb: queryA 579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614 : ** * * * * * *** * * *: 2vdq_A_1 416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 452 SecStr : -TTSEEEEEE SSSSSS EEEEEEGGGTEEEEE B : ExpBur :b-bbebbebeeebeeeeebbbbbbbeebbebbbbbbee: |