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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [924 aa] | Integrin alpha-V :ITAV_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [690 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 368V(P) 373W 403Y 406Y 426R 428Q(R) 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 679G(K) 680H(L) 683R(K) 717C(E) 718V(F) 719Q(R) 723S(T) 830R(I) 835L(R) (identity: 27.3 %/29.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6msl_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425 :** * * * * * * * * * * * **** * ** *: 6msl_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244 SecStr :S STTTTTT TTSEEEE TTSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGG S BTSEEEEE SSSSS EEEEEET: ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbebbbbbebeeeeeebbbbbbb: Contact : b b b b b bb b b queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518 :* * * * * * * *** * * ****** * * * * * * * : 6msl_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337 SecStr :TTGGGT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSS EEE-EEETT EEE TTS EEE EEEEEEE SSS EEEEEEE SSTT--: ExpBur :ebeeebbbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebebebeeeeeebbbbbbbbbbeeeeebeeeebebeeee--: Contact :b bb bbb b b bb b bbbbb b b b queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605 : *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** : 6msl_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430 SecStr :S TTSEEEEEE SS SSS EEEEEETT SGGG EEEEEEEETTEE SS SEEEE ------- SSS TTSEEEEEE TT SSS EEEEEETTTT: ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb: Contact : b b bb b b queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697 : * *** * ** * * * * * * ** ** ** * * : 6msl_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525 SecStr :EEEEE B EEEEEEEEEES SEE SS B TTT B EEEEEEEEEEE SSS S-----EEEEEEEEEESTT SSS EEETTT SSEEEEEE: ExpBur :bbbbbbbbbbbebeeebebeeeebebeeeebebeeeeeebbebebebbbebebeeebee-----ebebebebbbbeebeeeeeebbbbbeeeebeeeeeb: Contact : bb b b queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790 : * * * * ** * * * * *** * * * **** * * ** : 6msl_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614 SecStr :EEEBSS B EEEE TTTSS SSS EEEEEEEEE-------- S S SSS EE SSS SEEEEEEEE S-- TTTTS EEEEEE- SS: ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebeb--------eeeeebeeeebebebeeeeeeeeeeebbbbee--beeeebbebebebebe-bee: Contact : bbb b queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890 : * * * ** * * * * ** * * * * *** * * : 6msl_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709 SecStr : EEETTS EEEEEEEEEEE SS BTTEEEEEE SS EEEEE- S SSS EEEE TT--- EEEEEEESSB- TTEEEEEEEEEEE SSSS : ExpBur :eebebeeebebbbebebbbeeebbbebebbbebeebbebebb-beeeeebeebeeeeeeeee---eeebbbebeeeb-eeeeeeebbbebebebeeeeee: Contact : b b queryA 891:SVELHANVTCNN: 902 :** *: 6msl_A_1 710:SVKFDLQIQSSN: 721 SecStr : EE EEEEE S : ExpBur :ebebebebebeb: |