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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(PALS1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [335 aa] | Tight junction protein ZO-1 :ZO1_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [7 aa] | Gap junction gamma-1 protein :CXG1_HUMAN | 264D(S) 265I(V) 266P(G) 267L 268G(R) 282R(G) 283I(V) 284V(L) 318F(V) 321L 322S(L) 384Q(N) 385E(G) 386D(K) (identity: 14.3 %/22.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3shw_A_1 identity=22.6% |
queryA 253:TVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM-HGTLTFVLIPSQQIKPPPAKETV----: 347 : * * * * * * * ** *** * * * * * * * * * * : 3shw_A_1 1:SMKLVKFRKGDSVGLRLAGGNDV-GIFVAGVLEDSPAAKEGL-EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL---AQKKKDVYRRIVESDV: 95 SecStr : EEEEEEE SS EEEEEETTT-EEEEEEE SSSHHHHTT - TTEEEEEETTEE TT HHHHHHHHHHS TTSEEEEE---EEE HHHHHHHHHHT : ExpBur :eeeebebebeeebbeebbbbbee-bbbbbbeeeebebeeeeb-eebbbbbebeeeebeebbbbebeeebeebeeeeebebe---beeeeeebeebeeeee: Contact : bbbbb bbb b bb queryA 348:---IHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVIS---QEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKN: 441 : ** * ** **** ** * * * * * * * * * * : 3shw_A_1 96:GDSFYIRTHFEYE-KESPY------GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTXXXXXXXXXXXXXXXXXXX: 188 SecStr : EEEEE S B - SSTT------B B TT EEEEEESSGGG TTEEEEEEE TTS EEEEEEEE HHHHHHHHHHHH -------------------: ExpBur :bbbbebbbbbebe-eeeee------bbebeeeebbebbbbbeeeeeeebbbbbbeeeeeeeeebbbbbeeebeeebeeeee-------------------: Contact : b bbb queryA 442:KKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIA: 541 : ** * * ** ** * * * * * * : 3shw_A_1 189:XXXXXXXXXXXXXXXXXXQTKFPAYERVVL--REAGFLRPVTIFGPI---ADVAREKLAREEPDIYQIAKSEPXXXXXXXXXXGI---------------: 268 SecStr :------------------ SEEEEEE--E SS EEEESTT---HHHHHHHHHHH TTTEEE B ---------- B---------------: ExpBur :------------------eeebebbbebbe--eeeeeebbbbbbbbb---bbbbbeebeeeeeeebeebeeee----------ee---------------: queryA 542:AGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDT: 641 : * * * ** * * * * * * * ** * * *: 3shw_A_1 269:----------------IRLHTIKQIIDQDKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESR-KSARKLYERSHKLRKNNHHLFTT: 351 SecStr :---------------- HHHHHHHHTTT EEEE HHHHHHHHHTT EEEEEE S HHHHHHHHHHH TT - HHHHHHHHHHHHHHHGGG SE: ExpBur :----------------eeeebbeebbeeebbbbbeeebebbbebbeeeebbbbbbbbbeeeebbeebbeeebeeee-eebeeebeebeebeeeeeebbeb: queryA 642:AI-VNSDLDKAYQELLRLINKLDTEPQWV: 669 : * ** * * * * **: 3shw_A_1 352:TINLNSMNDGWYGALKEAIQQQQNQLVWV: 380 SecStr :EEE BTTB HHHHHHHHHHHHHHTS EEE: ExpBur :ebebebeeeebbeebeebbeebbeeebbe: |