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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(4irz_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
744 | R | 557 | 557 | K | e | 74.1 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [592 aa] | Integrin alpha4 subunit |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4irz_A_1 identity=34.4% |
queryA 322:DLFTELQKKIYVIEGTSKQD-LTSFNMELSS--SGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAG-YLGYTVTWLPSR-QK: 416 :** *** * * ** * * *** * ** * * * * * **** * * * : 4irz_A_1 138:DLRTELSKRI----APCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVY--NITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQH: 231 SecStr :T GGG EEE---- SS SS SSSGGGG BTSSEEE SS EEEEETTHHHHTBEEEEE--ETTTTEEEEB SS S TT BTSEEEEE SS SS: ExpBur :ebebeeeeeb----ebbbeeeeeeebeebbbbbbbbbbebbeebbbbbbbbbeeebbbbbbb--beeeeeebbbeeeeeebeeebebbebbbbbebeeee: queryA 417:TSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGF---EEVSELQGD: 513 :* *** * * * ***** * ** ** ** *** **** * * * * : 4irz_A_1 232:TTEVVGGAPQHEQIGKAYIFSIDEK--ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLL-VGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGS: 328 SecStr : EEEEEETTGGGT EEEEEEE SS--SEEEEEEEE STT TTSEEEEE SSSSSS EEE-EEETT SSSS EEEEEEE SSTT EEE SS B TT: ExpBur :ebbbbbbbbebeebbbbbbbbeeee--bbeeebebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeeebbbbbbbbbbeeeebebeebeebbebe: queryA 514:PGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA--ESQMIV: 609 : * **** * * ** ** *** *** * *** ** *** * * ****** * ** ** * * * ****** : 4irz_A_1 329:DKYA-ARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVL: 427 SecStr : TT- TTSEEE SSSSS EEEEETTHHHHTBEEEEE EETTEE SS SEEEEGGGT TT SEEEEEEEEE SS SSS EEEEEETTTTEEEE: ExpBur :eeeb-bebbbbbebbbebbebeeebbbbbbbbbeeeebbbbbbbbbeebbbeeebbebbbeeeeeebbbbbbbbbbebbbbebebebbbbbbbebbbbbb: queryA 610:LSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRR---RGLFP--GGRHELRRNIAVTT-: 703 :* **** * * * * ** * * * * * ** * * * * * * : 4irz_A_1 428:LRTRPVVIVDASLSH-PESVNRTKFDCVENGWPSV--CIDLTLCFSYKG--KEVPGYIV--LFYNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSR: 520 SecStr :E B EEEEEEEEE - S B TT STTS --EEEEEEEEEEE --TT SEEE--EEEEEESS S TTS SEEESSSTT SEEEEEEEEESS: ExpBur :bbbebbbebebebee-eeebeeeeeebebeeeebb--bbebebbbebee--eeeeeebb--bebebbbbeeeeeebeebbbbeeeeebeeeeeebebeee: queryA 704:SMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSE: 761 : * * * ** * * * ** * * * : 4irz_A_1 521:EANCRTHQAFMRKDVRDILTPIQIEAAYHL----GPHVISKASTEEFPP-LQPILQQK: 573 SecStr :S EEEEEEE SS SSS EEEEEEEEE---- S SS - EE : ExpBur :eeeeeebebbbeeeeebeeeebebbbebeb----beeeeeeeeeeebee-bebbbbee: |