Protein Model on 5xlr_A_1 focusing on 819-th site
(TEMPLATE: 
5xlr
)Protein Model on 5xlr_A_1 focusing on 819-th site
(TEMPLATE: 5xlr
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(5xlr_A auth_asym_id:A) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 819 | Y | 819 | 819 | Y | H | e | 22.6 |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1022 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5xlr_A_1 identity=93.9% |
queryA 33:HTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFEL: 132
:*************************************** ******************************************************* :
5xlr_A_1 33:HTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTXXXXXGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFEX: 132
SecStr : EEE SS SEEEEESS TTEEEEE ----- S SSEEEEE TT EEEEESS SSSS EEEEEESSSSEEEES -:
ExpBur :ebebeebbbbebeeeeeeeeeebeebbbbbeeebeeeee-----eeeeebebebbbbbbbeeeeebebbbbbeeeeeeeebbbbeeeeeebbbebbbbe-:
queryA 133:CDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFR: 232
: ******************* *****************************************************:
5xlr_A_1 133:XXXXXXXXXXXXXXXXHTMIFDNAFNCTFEYISDAXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFR: 232
SecStr :---------------- STTS SS EEE ------------ EEEEEEEETTEEEEEEEE SSS S EE B EE:
ExpBur :----------------eeebeeeeeeeeeeeeeee------------ebbebbbbbeeeeebbbbebebeeebeeeeeebebebebeeeeebeeeebebb:
queryA 233:AILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNAT: 332
:****** ************************************************************************************:
5xlr_A_1 233:AILTAFXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNAT: 332
SecStr :EEE ---------- EEEEE EEEEE GGG EE SSS HHHHHHHHHT SS EEEEEEEEEB EEEEE S TTHHHHS S:
ExpBur :bbeeee----------eebbbbbebeeebbbbbbeeeebbeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbeeeeeebebeebbeee:
queryA 333:KFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATS: 432
:****************************************************************************************************:
5xlr_A_1 333:KFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATS: 432
SecStr : STT EEEEE S TTTS TT SEEEESSS SSS TT BEEEEEEEEEE GGGGGGSSSS SHHHHT SS EEEEEE TTTS S:
ExpBur :ebebbebbeeeebeebbbebeebeeeeebebeeeeeeebeebeeebbbbbbbbbbbbebebbebbbeeeeeebbbebbbbbeeebbbbbbbebeeebbee:
queryA 433:TGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGL: 532
:****************************************************************************************************:
5xlr_A_1 433:TGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGL: 532
SecStr :S EEE SS TT TTS TTSTT SEEE TTS STTS EEEEEEEEE SSSS B S SSEEEEEETTE:
ExpBur :eeeeebeebbbeeeebeeeeebeeeeebbeeeeebeeeeeebeebbeebebeeeeeeeebbbbbbbbbbeeeeeebbbbbeeeeeeeeeeebbebebbeb:
queryA 533:TGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQ: 632
:****************************************************************************************************:
5xlr_A_1 533:TGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQ: 632
SecStr :EEEEEEEE TTS SEE TT EEE TTS EEEEESSS EEEEEEEES SSS S EEEE S SHHHHHHHTTT BTT SS B SS:
ExpBur :eeebbbeeeeeeeeeeebeeeeeeeeeebbebeeeeebebeeebbebbbbbbbebeeeeeebbbbbeebebeebeebbeeeebebebeeeeeeeebeeee:
queryA 633:AGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECA: 732
:**************************** **********************************************************:
5xlr_A_1 633:AGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXXVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECA: 732
SecStr :SSEEES B SS SEEETTTEEE -------------- EES SS EEE S EEEEEEEEEE EEE TTTTTTTT SHHH:
ExpBur :bbbbbebeeeeeeeeeebebeeebbbbe--------------ebbeeeeeeeeeeeeeeeebebbeebebebeeebbbbbbebbebebeebbbeebeebe:
queryA 733:NLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLI: 832
:******************************************************************************************* *:
5xlr_A_1 733:NLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLXXXXXXXXI: 832
SecStr :HHHHHH SHHHHHHHHHHHHHHHHHHHHHHHH SS S BSSSSB TTTS TTTT SS HHHHHHHHHHHTT HHHH -------- :
ExpBur :ebbeeeeebbeebeeebeebbeebbebbeebbeeeeeeeeeeeebebeebebbebbbeeeeeeeebebbebbbebbeeeeeeeeeeebeee--------e:
queryA 833:CAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQD: 932
:****************************************************************************************************:
5xlr_A_1 833:CAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQD: 932
SecStr : SSSEEE SS HHHHHHHHHHHHHHHHSS S TTSS HHHHHHHHHHHHT THHHHHTHHHHHHHHHHHHHHHHHHTTS SSTTHHHHH:
ExpBur :eeeeebbbebeeeebeeeebbeebbbbbbbbbebbebbeeebeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebbebbe:
queryA 933:VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM:1032
:****************************************************************************************************:
5xlr_A_1 933:VVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM:1032
SecStr :HHHHHHHHHHHHHHHHS SSS S TTTHHHHS SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTTSSSSB :
ExpBur :beeebeeebeebbeebeeeeeeeebebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbbebeeeeebbeeebbb:
queryA 1033:SFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVY:1120
:****************************************************************************************:
5xlr_A_1 1033:SFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVY:1120
SecStr :EEEEEETTEEEEEEEEEE EEEB EESSS EE TTS EEEBSSS EEE SSS B GGG EES SSS :
ExpBur :bbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebeebeebeebbbeebeebbeebbeeeeebeeeebeeeeeeeeeeeebeeeee:
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[assembly_id:1]
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