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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [962 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
2 | b | W 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 691N 1112I (identity: 100.0 %/88.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zh5_C_1 identity=88.3% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130 :**************************************** **************************************************: 7zh5_C_1 18:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXXXXIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 117 SecStr : EEEESS B SSS S EEEEEEEE SSEEEE B ---------- B S EEEEEE SSS EEEESS SSSS EEEEEESSSSEEEEEE : ExpBur :eebebbebbbbbbeeeeeeeeeeebeeebbbbeeebebee----------eebeebbbbbbbbeeeebebbbbbeeeeeeeebbbbeeeeeeeeeeeeee: queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230 :* **************************************************: 7zh5_C_1 118:EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 217 SecStr : ------------------------------------------------- EEEEEEEE SS EEEEEEEE SSS S BEEEEEE E: ExpBur :e-------------------------------------------------ebebbbbbeeeeebebbebeeebeeeebbbeeebbbeeeeeeebebebee: queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330 :******** ********************************************************************** *****: 7zh5_C_1 218:FRAILTAFXXXXXXXXXSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPXXXXXXXXGEVFN: 317 SecStr :EE --------- EEEEE EEEEEEEEE TTSSEEEEEETTS HHHHHHHHHT SS SEEEEEEEEEB EEEEE -------- SSS: ExpBur :bbeeeeee---------eeebebbbebeebebbbebeeebebeebbbbebebbbbbebeeeeeebeebeeebeebebeeebebebee--------eeeee: queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430 :****************************************************************************************************: 7zh5_C_1 318:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 417 SecStr : S STT EEE SS TTSSS SEEEESS SSSSSSS BSSEEEEEEEE GGGTTT SS SSGGGS SSSEEEEEEEE SSS : ExpBur :eeebebeebbeeeebeeeeeebebbeeeeeeeeeeeeebeeeebeeeebbbbbbbbbbbbbebeeebeeeeebeebbebbbebeeebbbbbbbbbeeebb: queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530 :***************************** ************************************ **************: 7zh5_C_1 418:TSTGNYNYKYRYLRHGKLRPFERDISNVPXXXXXXXXXXXXXXXXWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCXXXXXTDLIKNQCVNFNFN: 517 SecStr : TT B SSEEES SS SS S ---------------- EEE B TTS TTTS EEEEEEE SSSSSSB ----- SS EEEEET: ExpBur :eeebbeebeebeebeeebeeeeebeeeee----------------eebebbebeeebeeeebbbbbbbbbbbeeeeeeebb-----eeeeeeebbebebe: queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630 :****************************************************************************************************: 7zh5_C_1 518:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 617 SecStr :TEEEEEEEEE TT EE TTSSEEEEE TTT EEEEE EEEEEEEE SSS EEEE S HHHHHHHTTTT BSS SS S B : ExpBur :ebeeebebeeeeeebeeeeeebeeeeeeeebbebeeeeebbebeeebeebbbbbbebeeeeeebbbbbeebebeebeebeeeeebebebeeeebeeeeee: queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730 :******************************** **********************************************************: 7zh5_C_1 618:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 717 SecStr : SSSEEES EE S B SEEETTTEEEE ---------- EEEEB S SSEEE EEEEEEEEEEE EEE HHHHSSTT HH: ExpBur :beebbbbebeeeeeeeebebebeeebbbbeee----------ebbbbeeeeeeeeeeeeeeeeeebbbebebebeeebbbbbbebbebebeebbbeebee: Contact : b queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830 :********************************************************************************* : 7zh5_C_1 718:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXX: 817 SecStr :HHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHH SS S BTTB TTSS SSSSSSS HHHHHHHHHS -------------------: ExpBur :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeebeeeebebbebbbebbeee-------------------: queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930 : ***************************************************************************************************: 7zh5_C_1 818:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 917 SecStr :- TT EEE SS HHHHHHHHHHHHHHHHSS TT SSSS SHHHHHHHHHTTT THHHHHSHHHHHHHHHHHHHHHHHHHHH SSTTHHH: ExpBur :-eeeeeebebeeeeeeeeeeebbeebbbbbbbbbebbbebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeeeeebeeb: queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030 :****************************************************************************************************: 7zh5_C_1 918:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1017 SecStr :HHHHHHHHHHHHHHHHTTT SSSS SSTTSSTTT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTTSSSSEE: ExpBur :eebeeebeeeeeebeeebeeeeebeeeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb: queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119 :*****************************************************************************************: 7zh5_C_1 1018:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106 SecStr :EEEEEEEETTEEEEEEEEEEE EEE S EESSSEEEEESSSEEE BTTB EEE SSS EE TTTEEEEEESSS SS EE : ExpBur :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbebbbeeeebeeeebeeeeeeeeeeeeeebee: Contact : b |