Protein Model on 8tc0_C_1_R_1 (TEMPLATE: 8tc0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [1091 aa] Spike glycoprotein :U5WI05_SARS
2 b R 1 (R) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 444R 445H 449R 463D 464G (identity: 100.0 %/91.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8tc0_C_1 identity=91.0%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                : *  ***   *  **  ** ******* ****  * * ** **** **** * *    * ** ***************** ****************** :
8tc0_C_1       1:KCLDFDDRTPPANTQFLSSHRGVYYPDDIFRSNVLHLVQDHFLPFDSNVTRFITFGLNFDNPIIPFKDGIYFAATEKSNVIRGWVFGSTMNNKSQSVIIM: 100
SecStr          :      S       EEE TT   B  SS    SEEEEEEEEE  TT EEEEEEEETTEE    EE TT EEEEEEESS    EEEEESSSSTTS EEEEE:    
ExpBur          :eeeebeeeeeeeeeeeebbebbbbbbeeeebbeeeeeeeebbbebebebeebebeeeebbbeebebeebbbbbbbbebbbbbbbbbbbebeeebbbbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :***** *************** * *   **    ** ********* *  * **  ** **** ****** ****** ** *****     ** *** **:
8tc0_C_1     101:NNSTNLVIRACNFELCDNPFFVVLKSNNTQIPSYIFNNAFNCTFEYVSKDFNLDLGEKPGNFKDLREFVFRNKDGFLHVYSGYQPISAASGLPTGFNALK: 200
SecStr          :E SS EEEEEE EEEEEEEEEEEETTTTEEEEEEEEEEE    EEEE        S   SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS       BE:    
ExpBur          :eebebbbbebbbbebbebbbbbbeeeeeeeeeeebbeebeeeeeeeebeeeeeebbeeeeebebbebbbbbeeeeebbbbbbeeebebeebbbeebebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***************  **** *  * *************************************************************** **  *****:
8tc0_C_1     201:PIFKLPLGINITNFRTLLTAFPPRPDYWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVAPSKEVVRFP: 300
SecStr          :EEEEE       EEEEEEEE  SSTT      EEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S   SEEEE         EEEEE  :    
ExpBur          :eebebebebebeebbbbbbbbbebeeeebbbbbbbbbbebeebebbbebeeebebeebbbbeeebbbbbbbeeeebebeebeeebeebeeeeeeebbbbb:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :*************** ********** *************** ******************************************************** :
8tc0_C_1     301:NITNLCPFGEVFNATTFPSVYAWERKRISNCVADYSVLYNSTSFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFT: 400
SecStr          :   SB  HHHHHT S   BGGG EEEEE SEE  GGGGGGT   SEEEEESS GGGGGG EEEEEEEEEEEEEHHHHTTSSTT  SHHHHHT    TT  :    
ExpBur          :ebeeebebeebbeeeebbbbbbbeeeebeebebebeebeeebeeeeeebeebeeeebebbbbbebebbbbbbebebbebbbeeeebebbbebbebeeebe:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :************** ********* ***************************** ************ * ******************************:
8tc0_C_1     401:GCVLAWNTRNIDATQTGNYNYKYRSLRHGKLRPFERDISNVPFSPDGKPCTPPAFNCYWPLNDYGFYITNGIGYQPYRVVVLSFELLNAPATVCGPKLST: 500
SecStr          :EEEEEEE HHHH BSS B   EEE   SS   TT        B TT S   TTSTT B SEEE  BBTT  GGGSEEEEEEEEEE SSS  SEE S    :    
ExpBur          :bbbbbbebeeebbeeebbeebebbbeeeeebeeeeebeeeeebbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbbbbebeebebebbbeeeee:    
Contact         :                          bb   b             bb                                                     

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :************************************************************************ ***************            :
8tc0_C_1     501:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNTSSEVAVLYQDVNCTDXXXXXXXXXXXX: 600
SecStr          :    SS EEEEETTEEEEEEEEE      TT  EEE TT  EEEEE TTT  EEEEE S    EEEEES TTT S  EEEETT     ------------:    
ExpBur          :eeeeeebbebbbbbeeeebebeeeeeebeeeebbbeeeeeebebbbbbeeeebbebeebeebbbbbbbbbeeebeeebbbbeebebee------------:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                : **  ******************************************      ***********************************************:
8tc0_C_1     601:SWRVHSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 700
SecStr          :  S S   S  EEETTEEEES EE SS B  SEEEETTEEEEEEE  ------ EEEEEEEB           SSEEEEEEEEEEEEEEEEEE    EEE:    
ExpBur          :eeebeeeeeeebebebbbbbebbeeeeeeeeebebeeebbbbbeeee------eebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbb:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :************************************ *********************** ***************************************:
8tc0_C_1     701:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAVEQDRNTREVFAQVKQMYKTPTLKDFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 800
SecStr          :E HHHHHHTT HHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE GGGS  SSSSS S HHHHHHHHHS  SSSSS  :    
ExpBur          :bebeebbbeebeebbebbeeeeebbeebeebbeebbebbbebbeebbeebeeeeeebeebebeebebeebbbeeeeeeeebebbbbbbeebeeeeeeeee:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :****************************************************************************************************:
8tc0_C_1     801:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 900
SecStr          : HHHHHHT SS  HHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHT STTTTSS     HHHHHHHHHHTTT  HHHHHHTHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeeeeeeeeebbebeeebbebeeeebeeeebbebbbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
8tc0_C_1     901:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1000
SecStr          :HHHHS  STTHHHHHHHHHHHHHHHHHHHGGG  SSSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:    
ExpBur          :eebeeeeeebeebbbbbeebeebbeebeeebeeeeebebbebeebeeeeeeeebbebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :***************************************************************************************** **********:
8tc0_C_1    1001:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGSCDVVIGIINN:1100
SecStr          :   STTTSSSSEEEE  EEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEE TTSEEEE SSSEEEE SSS   EE BTTT EEEEETTT SS EE :    
ExpBur          :ebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbbeeebbebeebbbbeeeeebbbbbeebbeeeebbeeebeeeeebeebeeeeee:    

queryA      1118:TVYDPLQPE:1126
                :*********:
8tc0_C_1    1101:TVYDPLQPE:1109
SecStr          :  B TTTT :    
ExpBur          :ebeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123