Protein Model on 6ack_C_1_B_1
(TEMPLATE: 
6ack
)Protein Model on 6ack_C_1_B_1
(TEMPLATE: 6ack
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1057 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 304N 306R 533T 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 555V 558F 559T 573I 574S 575P 576C 577S 578F 599Q 600D 601V 632Q 633A 651P 653G 654A 655G 679M 681L 682G 683A 684D 685S 686S 687I 689Y 690S 691N 693T 694I 695A 697P 929K 939Q 943T 947Q 950S 951N 952F 953G 968K 984Q 988T 1021R 1022V 1023D 1027K 1028G 1029Y 1051P 1061P 1071F 1072P 1074E 1075G 1076V 1089R 1103F 1105S 1110V (identity: 100.0 %/95.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ack_C_1 identity=95.9% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6ack_C_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S S EEEE TT SSS SEEEEEE S TT EEEEE BTTB EE SSEEEEEEESS EEEESSSSTTSEEEEEE:
ExpBur :eebebeeeeeeeeeebebeebbbbeebeeeeeeebeeeeeebbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6ack_C_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSEEEEEEEE S SSS TT TT S EEEEEEE S SS EEEEEEEEEETTEEEE EE SSS :
ExpBur :beeebbbbebbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebebbbbbbbbeeeeebbbbebeeebeeeeeeeeeeebbe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6ack_C_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr : EEE EEEE B ---- B S EEEEEE EEEEEE SSS EEEEE SSS HHHHHHTTTT SS SEEEEEEEEE EEE :
ExpBur :eebebeeeeebeebbbbbbbbe----ebbbbebbbbbbebeebbbbbebbeebebeebbbbeebbbbbbbbeeeebebeebeeebeebeeeeebebebee:
Contact : b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:* ***********************************************************************************************:
6ack_C_1 318:NXXXXCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : ---- STTTTT S STT EEEEE SS TTTS SSEEEEEESSS STTSTTS BSSEEEEEEEEEGGGGGGSSSS SSGGGTS SSS :
ExpBur :e----eebeebbebeebebbbbbeeeebbeeebebeebeebeebebeebeebebeebeeeebbbbbbbbbbbbbebbebbbeeeeeebbbbbbbbbeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:*********************************************************************************************** *:
6ack_C_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGXXXXT: 517
SecStr : EEEEEE TTTS SS B SEEE SS TT BBTTB TTSTT B SEEE B TTS GGGSEEEEEEEE SSSS B ---- :
ExpBur :bbbbbbebeeebbeeebbeebeebeebeeebeebeebeeeeebbeeeeebeeeeeebeebbeebebeeeeeeeebbbbbbbbbbbeeeeeebbee----e:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6ack_C_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SS EEE SS EE EEE TT SSSS EEEETTTEEEEE S SEEEEEEEES SSS EEEE S SSHHHHHHHTT SS:
ExpBur :ebeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeeebbebbeeeebbbeeebbebbbbbbbbbbeeeeebbbbbeebebeebeebbeeeebeb:
Contact : b bbb bbbbbbbb bb bbbbbb bbb
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6ack_C_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS S EE SSS EEET S SS BTTTB ------------- S SS B S B EEEEEEE EE:
ExpBur :eeeeeeeebebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------bbbbeebeeeeeeeeeeeeeeebbbebebebbebbbbbbbbbbe:
Contact : bb b bbb b bbbbbbb bbb bbb b
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6ack_C_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr : TTTSS SS SHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHT SS STT TTTS SSSS SS HHHHHHHHHS ------:
ExpBur :bebeebbbeeeeebeeebeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbbbeeebeee------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6ack_C_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TT EE SS HHHHHHHHHHHHHHHHSS S SSSS SHHHHHHHTTTTT THHHHHTHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeebeeeebbbbbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6ack_C_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTHHHHHHHHHHHHHHHHHHHHHHS SSS SSTTSGGGT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:
ExpBur :eebeeeeeebbebbebeeebeeeeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b b b b bbbb b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6ack_C_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTSSSSSS EEEEEEETTEEEEEEE B B SSB SSSSB SSS EETTTT EE SSS EE TTTS BSSSSS B S:
ExpBur :bbeeeeebeebebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbebeeeebbbbbeeeebbeebeebeeebbeeebeebeeeeeeebebee:
Contact : bbb bbb b b bb bbb b b b b
queryA 1118:TV:1119
:**:
6ack_C_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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