Protein Model on 6acg_C_1_B_1
(TEMPLATE: 
6acg
)Protein Model on 6acg_C_1_B_1
(TEMPLATE: 6acg
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1057 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 304N 306R 544R 546Q 548F 549Q 550Q 551F 552G 553R 557D 558F 573I 574S 575P 576C 578F 600D 632Q 633A 651P 653G 654A 655G 681L 682G 683A 684D 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 943T 947Q 950S 951N 952F 984Q 988T 999E 1020K 1021R 1022V 1023D 1027K 1029Y 1061P 1071F 1072P 1074E 1076V 1089R 1103F 1105S 1107N 1109D 1110V (identity: 100.0 %/95.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6acg_C_1 identity=95.9% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6acg_C_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : SS EEE SS B SS S EEEEEEEE TT EEEE SS EE S EEEEE SS EEEESS STT EEEEE:
ExpBur :eeeebebeeeeeeeeeebbebbbbeebeeeeeeebeeeeeebbebebebebbebeeebbbbeeeebeebbbbbbbbbbebbbbbbbbbebeeebebbbbb:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6acg_C_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSEEEEEEE S EE SSS TT SS EEEEEEE S SSS EEEEEEEETTEEEEEE SSS BE:
ExpBur :beeebbbbebbbbebbebebbbbeeeebeeeeeebeeeeeeeebeeebeeeeeebeeeeeebebbbbbbbbeeebebebbebeeebeeeeeeeeeebbbe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6acg_C_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEEEE SEEEE EE ---- S EEEE EEEEEEEEE SSS EEEEEESTT HHHHHHHHHT SS S EEEEEE EEE :
ExpBur :eeeebeeeeebeebbebbbbbe----ebbbeebbbbbbebeebebbbebbeeeebeebbbbebebbbebebeeeeeebeebeeeeeebeeeeeeebebee:
Contact : b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:* ***********************************************************************************************:
6acg_C_1 318:NXXXXCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : ---- SSSSS S SSS EEEE S STTTTT SSEEEEE SSS STTSSS BEEEEEEEEEEEGGGTTTSSSS SHHHHT SSS :
ExpBur :e----ebbeebbeeeebeebebbeeeebeebeeebeebeeeeebebeebeebebeebeeeebbebebbbbbbbeebeebbbeeeeeebbbebbbbeeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:*********************************************************************************************** *:
6acg_C_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGXXXXT: 517
SecStr : EEEEE TTTS SS EE SS TT TTS TT TT SEE TT STT EEEEEEEEEE SSSS B ---- :
ExpBur :bbbbbbebeeebbeeeebeebeebebbeeebeeeeebeeeeebbeeeeeeeeeeeebeebbeebebeeebeeeebbbbbbbbbbbeeeeeebbee----e:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6acg_C_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SSEEEEE SS EEEEEEEE S TT B TT S EEEETTTEEEEEE EEEEEE SSS EEEESS SHHHHHHHHTT SS:
ExpBur :eeeeeebbebebeeeeeebebeebeeebeeeeebeeeeeeebebbebeeeeebebeeeebebbbbbbbbbeeebeeebbbbeebebeebeebbeeeeeeb:
Contact : b b bbbbbb bb bbbb b b
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6acg_C_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS S EEE STT EEET S SS TTT ------------- SS SS B SEE EEEEEEE EE:
ExpBur :eeeeeeeeeebeebeebbbbebeeeeebeebebebeeebbbee-------------bbbbeeeeeeeeeeeeeeeeeebebebebebeeebbbbbbbbbe:
Contact : bb b bbb bbbbbbbbbbb bbb
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6acg_C_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr : HHHHSSSS SHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH SSS TTTS SSSS S HHHHHHHHH ------:
ExpBur :bebeebbbbeeeebeebbeeeeeebeebeeebeebeebbbebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbebeeeeeee------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6acg_C_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TTS EE SS HHHHHHHHHHHHHHHHSS SS SSS SHHHHHHTTTTTT HHHHTTSHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebbeebbeeeeeebbeebbebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6acg_C_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTTHHHHHHHHHHHHHHHHHHHHT SSSS SSTTTHHHH SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:
ExpBur :eebeeeeeebbebeeeeeebbeeeeebeeebeeeeebebeebeebeeeeeeeebbeebeebbeebbeebeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b b bbb b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6acg_C_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTTSSSSS EEEEEEETTEEEEEEE EE B S SSSS SS TTTT EE SSS EE TTTS S SSS S:
ExpBur :bbeeeebbbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebbebeeebeeeebeeeeeeeeeebebee:
Contact : bbbb b b b bb b b b b b b bb
queryA 1118:TV:1119
:**:
6acg_C_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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