Protein Model on 8tc1_C_1_A_1
(TEMPLATE: 
8tc1
)Protein Model on 8tc1_C_1_A_1
(TEMPLATE: 8tc1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1088 aa] | Spike glycoprotein :Q3ZTF3_SARS | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1088 aa] | Spike glycoprotein :Q3ZTF3_SARS | 42Y 45E 46I 47F 110K 112Q 191D 192G 193F 217K 221K 223P 224L 225G 269N 352Y 356Y 357N 360F(S) 361F 362S 364F 372T 375N 414D 489I 717S 719D 722M 727D 733N 736L 737Q 738Y 740S 741F 743T(R) 744Q 747R 768K 769Q 770M 771Y 815F 816M 817K 818Q 819Y 822C 823L 826I 827N 829R 836K 837F 839G 842V 843L 845P 846L 847L 848T 851M 855Y 865T 868W 871G 876L 877Q 878I 879P 882M 886Y 894T 895Q 896N 899Y 902Q 945V 948L 949S 957S 958V 960N 961D 963L 964S 965R 966L 967D 984Q 987Q 1001R 1012S 1013E 1021R 1095Q (identity: 97.9 %/96.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8tc1_C_1 identity=96.9% |
queryA 16:LDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVI: 115
:************************************************************* **************************************:
8tc1_C_1 1:LDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVI: 100
SecStr : S SS B EEEE S B SS SEEEEEEEEE TT EEEEEEEETTEE EE TT EEEEEEESS EEEEESSSSTTSEEEE:
ExpBur :eebeeebeeeeeeeeeebebbebbbbbbeeeebbeeeeebeeebbbbebebebbbbeeeebbbbebebeebbbbbbbbbbbbbbbbbbbbebeeebbbbb:
Contact : b bbb b b
queryA 116:IINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNT: 215
:*********************** ****************************************************************************:
8tc1_C_1 101:IINNSTNVVIRACNFELCDNPFFVVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNT: 200
SecStr :EEEETTEEEEEEEEEEE SS EEEEETTTTEEEEE SEEEEEEEEEEEE S SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS :
ExpBur :bbeebebebbebbbbebbebbbbbbbeeeeeeeeebbeeebeeeeeeeebeeeeeebeeeeeebeebebbbbbeeeeebebbebeeebeeeeebbeebeb:
Contact : bbb
queryA 216:LKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVR: 315
:*********** *************** ***********************************************************************:
8tc1_C_1 201:LKPIFKLPLGIKITNFRAILTAFSPAQGTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVR: 300
SecStr :BEEEEEEE EEEEEEEEEESSSS B EEEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHT S SEEEE EEEE:
ExpBur :beeebebebebebeebbbbbbbbbeeeeeebbbbbbbbbbebeebebbbebbeeeebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeeeebbb:
Contact : b b bbb b
queryA 316:FPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDD: 415
:**************************** *************** *******************************************************:
8tc1_C_1 301:FPNITNLCPFGEVFNATKFPSVYAWERKRISNCVADYSVLYNSTSFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDD: 400
SecStr : SB HHHHHT S BGGG EEEEE SEE GGGGGGT SEEEEESS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT SHHHHHT TT:
ExpBur :bbebeeebebeebbeeeebbbbeebeeeebeebebeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbeebbebbbeeeebebbbebbebbee:
Contact : b bb bbb b b b b
queryA 416:FMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKL: 515
:********************************************** ********* ****** ****** ****************************:
8tc1_C_1 401:FMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSSDGKPCTPPAPNCYWPLRGYGFYTTSGIGYQPYRVVVLSFELLNAPATVCGPKL: 500
SecStr : EEEEEEE HHHH BSS B EEE SS TT B TT S SSSTT B SEEE BBTT GGGSEEEEEEEEEEESSS EE S :
ExpBur :bebbbbbbebeeebbeeebbeebebbeeeeeebeeeeebeeeebbbeeeeeeeeeeeebeebbebbebeeebeebebbbbbbbebbebeeeebebbbeee:
Contact : b
queryA 516:STDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQL: 615
:********************************************************************************************* :
8tc1_C_1 501:STDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTLXXXXXX: 600
SecStr : SSEEEEEETTEEEEEEEEE TT EEE TT EEEEE TTT EEEEE S EEEEEES TTT S EEEEET SS ------:
ExpBur :eeeeeeeebbebbbbbeeeebebeeeeeebeeeebbbeeeeeebbbbbbeeeeebbebeebeebbbbbbbbbeeeeeeebbbbeebebeeeeee------:
queryA 616:TPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAK: 715
: ********************************************** *********************************************:
8tc1_C_1 601:XXAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAK: 700
SecStr :-- S S TT EEETTEEEES EE S SEEEETTEEEEEEE ------- EEEEEEE S SSEEEEEEEEEEEEEEEEEE E:
ExpBur :--eeebeeeeeebbebebbbbbebbeeeeeeeeebebeeebbbbbeee-------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbb:
queryA 716:TSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGF: 815
:*************************** ********************* ************ *************************************:
8tc1_C_1 701:TSVDCNMYICGDSTECANLLLQYGSFCRQLNRALSGIAAEQDRNTREVFVQVKQMYKTPTLKDFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGF: 800
SecStr :EEE HHHHHHTT HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH SS S TTT GGGS SSSS SS HHHHHHHHTS S SSS:
ExpBur :bebebeebbbeebeebbeebeebeeebeebeebbeebbeebbbbbeebbeebeeeeeebeebebeebebeebbbeeebeeeebebbbbbbeebeeeeeee:
Contact : b b b b b bbb bb bb b bbbb b
queryA 816:MKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQ: 915
:****************************************************************************************************:
8tc1_C_1 801:MKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQ: 900
SecStr : HHHHTT GGG HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTSTTSSS HHHHHHHHHHTTT HHHHHHTHHHHHHHHHHHHHH:
ExpBur :eeeeeebeeeeeeeeeebebeeebbeeeeeebeeeebbebbbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbee:
Contact :bbbb bb bb b bb b bb bbbb b b b b b bbbb b b bbb b b
queryA 916:IQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECV:1015
:****************************************************************************************************:
8tc1_C_1 901:IQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECV:1000
SecStr :HHHHHHS STTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT:
ExpBur :beeebeeeeeebeebbebbeebbebbeebeeebeeeeebebbebeebeeeeeeebbeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebb:
Contact : b bb bb bb bbbbb b b b bb
queryA 1016:LGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGII:1115
:**************************************************************** *********************************:
8tc1_C_1 1001:LGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFSXXSWFITQRNFFSPQIITTDNTFVSGNCDVVIGII:1100
SecStr :SS STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEE SSEEEEE -- EEEEESSS EE GGG EEEEESSSSTT E:
ExpBur :bbebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeebbbeeeebbbbee--ebbbbbeebbeeeebeeebbeeeeeeeebeebe:
Contact : b b
queryA 1116:NNTVY:1120
:*****:
8tc1_C_1 1101:NNTVY:1105
SecStr :E :
ExpBur :eeebe:
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[assembly_id:1]
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