Protein Model on 8h14_C_1_A_1
(TEMPLATE: 
8h14
)Protein Model on 8h14_C_1_A_1
(TEMPLATE: 8h14
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1029 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1029 aa] | Spike glycoprotein :SPIKE_SARS | 54L 56Q 301Q 304N 306R 342R 368G 369V 370S 372T 373K 377L 383Y 390K 392D 395R 402T 403G 404V 407D 408Y 440Y 442Y 447K 450P 451F 453R 455I 456S 479N 489I 503L 504L 505N 506A 531G 532L 533T 537V 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 556S 557D 560D 572D 574S 575P 576C 577S 578F 599Q 600D 602N 620R 651P 654A 655G 679M 681L 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 947Q 950S 951N 952F 953G 967D 969V(C) 984Q 992Q 999E 1021R 1022V 1023D 1028G 1029Y 1054E 1059T 1061P 1071F 1072P 1073R 1089R 1103F 1105S 1110V (identity: 99.1 %/94.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h14_C_1 identity=94.0% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h14_C_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEESS EE SS S EEEEEEEE TTEEEEEE ------- EE S EEEEEEESS EEEEEEESS STTS EEEEEE SS EEEEEE E:
ExpBur :eebebbebbbbbeeeeebbeeeeebeebbbebeeebebee-------eeebebeebbbbbbbbeeebbbbbbbbbebeeebebbbbbeeeebebbebbbb:
Contact : b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:******** ******************* ***************************************************:
8h14_C_1 121:ELCDNPFFXXXXXXXXXXXTMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr :EE SS B ----------- SEEEE S EEEE ----------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEEE E:
ExpBur :ebeeebee-----------eebeeeeeeeeeeeeeeee-----------eebbbbbbbeeeeebebbebeeebeeeeebbeeeebbeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h14_C_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ----------- EEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHT S SEEEE EEEEE SB HHHHHS:
ExpBur :bbbbeee-----------ebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeeeebeebeeebeebeeeeebebbbbeeeeeebebeebbe:
Contact : b b b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*********************************************************************************** ****************:
8h14_C_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPCDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGGGTT SEEEEESS GGGTTS EESSEEEEEEEEEGGGGGGSSTT SHHHHHT SS EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbeeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbeeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : b bbb bb b b b b b bbb bb
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h14_C_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr : SS B EEE SS TT B SSS SSSSS B SEEE B SSS GGGSEEEEEEEE BSSS EE S SSEEEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeebeeeeebbeeeeeeeeeeeebeebbeebebeeeeeeeebbbbbbbebbebeeeebbbbbeeeeeebeeeebbebbbb:
Contact : b b b bb b bb b b bbbb
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:************************************************************************* ************:
8h14_C_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCXXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TT EEEEE SSS EEEEE S EEEEE TTT S EEEESS --------------- S S EE:
ExpBur :beeeebbbeeeeeebeeeebbbeeeeeebbbbbbeeeeebbebeebeebebbbbbbbeeeeeeebbbbeebee---------------eebeeeeeeeee:
Contact :bbb b bbbb bbbbbbb bb b b bbbbb bb b b
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ***********************************************************:
8h14_C_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SS EEES EE SS SEEEETTEEEEEE --------- EEEEEE SSEEEEEEEEEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbbee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b bb b b bbb bbbbb bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:****************************************************************************************************:
8h14_C_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 820
SecStr :HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE GGGS SSSSSSS HHHHHHHHHS SSSSS HHHHTT SSS :
ExpBur :beebbeebeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeebbebbebbbeebeeeeeeeeeeeeebeeeeeeee:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h14_C_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHTTTTTTTSS HHHHHHHHHHHTT THHHHHSHHHHHHHHHHHHHHHHHHHHS STTHHH:
ExpBur :ebbebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebbeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************** *************************************************************:
8h14_C_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKCEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG SSSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b b bbbb b b b b b bbb bb
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h14_C_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEEESSSEEEE SSSEEEE SSS EE BTTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbbeeebbeeeebbbbeeeeebebbbeebeeeeebbeeebeeeeeeeeeeeeeeeebeeee:
Contact : b b b bbb b b b b
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[assembly_id:1]
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