Protein Model on 8h0y_C_1_A_1
(TEMPLATE: 
8h0y
)Protein Model on 8h0y_C_1_A_1
(TEMPLATE: 8h0y
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1031 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | A 1 (B) | polymer(polypeptide(L)) [1019 aa] | Spike glycoprotein :SPIKE_SARS | 45E 46I 47F 51T 110K 191D 192G 193F 217K 221K 223P 224L 225G 227N 269N 352Y 353S 356Y 357N 360F 361F 362S 364F 371A 372T 375N 414D 415D 489I 719D 721N 722M 727D 733N 737Q 738Y 740S 741F 744Q 747R 768K 769Q 770M 771Y 772K 779F 815F 816M 817K 818Q 819Y 823L 826I 829R 836K 837F 842V 843L 845P 846L 848T 851M 855Y 865T 868W 871G 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 903K 945V 948L 949S 957S 958V 960N 961D 963L 964S 965R 966L 967D(C) 976D 984Q 987Q 994L 1001R 1012S 1013E 1021R 1100D (identity: 99.0 %/94.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h0y_C_1 identity=94.1% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:***************************************** *****************************************************:
8h0y_C_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEETT EE S S EEEEEEEE TTEEEEEEE ------ EE TT EEEEEEESS EEEEESSSSTTS EEEEEE SS EEEEEEEE:
ExpBur :eebebbebbbbbbeeeebbeeeeebeeebbebebebebeee------eeebebeebbbbbbbbeeebbebbbbbbebeeebebbbbbeeeebeebebbbb:
Contact : bbb b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:********* ****************** ***************************************************:
8h0y_C_1 121:ELCDNPFFAXXXXXXXXXXXMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr :EE S ----------- EEEEEEEEEEEE ----------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEE E:
ExpBur :ebeeebeeb-----------ebeeeeeeeeeeeebeee-----------eebebbbbbeeeeebebbebeeebeeeeebeeeeebbeeeeebebebebee:
Contact : bbb b b bbb b
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h0y_C_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEE ----------- EEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S SEEEE B EEEE B HHHHTT:
ExpBur :bbbbbee-----------ebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeeeebbbbbeeeeebebeebbe:
Contact : b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h0y_C_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S GGG EEEEE SEE GGGTTT SEEEEESS GGGTTS EESSEEEEEEEEEGGGGGGSSTT SHHHHHT SS EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebebeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : bb bb bbb b bb b bb
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h0y_C_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :BSS EEEEEEE SS TT B SSSS TTSTT B SEEEEEEBTTS GGGSEEEEEEEE BSSS EE S SSEEEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbebeeeebebbbeeeeeebeeeebbebbbb:
Contact : b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:************************************************************************* ************:
8h0y_C_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCXXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TT EEEEE SSS EEEEE SB EEEEE TTT S EEEETT --------------- S S EEE:
ExpBur :bbeeebbbeeeeeebeeeebbeeeeeeeeebbbbbeeeebbebeebeebebbbbbbbeeeeeebbbbbeebee---------------eebeeeeeeeee:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h0y_C_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSSEEES EE S SEEEETTEEEEEE -------- EEEEEE SSEEEEEEEEEEEEEEEEEE EEEE HHHHHT S HH:
ExpBur :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeebbbbbbbbebebeebbbeebee:
Contact : b bb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:****************************************************************************************************:
8h0y_C_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 820
SecStr :HHHHHGGG HHHHHHHHHHHHHHHHHHHHHHHHH SS S BSSS B GGGS TTSSSSS HHHHHHHTSS S SSS HHHHHSS SS :
ExpBur :beebbeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeebbebbbbbbeebeeeeeeeeeeeeebeeeeeeee:
Contact : b bb bb b b bbbbb b bbbbb b b b
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h0y_C_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHTTTEEEE SS HHHHHHHHHHHHHHHHHTTTTTTTSS HHHHHHHHHHHHT THHHHTSHHHHHHHHHHHHHHHHHHHHS S SHHH:
ExpBur :eebebeeebbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:
Contact : bb bb bb b b b b b bb bbbbbb b b bb bb b
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h0y_C_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbebbeeeebbbeeeb:
Contact : b bb bb bb bbbbb b b b b b bb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h0y_C_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEE SS EEEE SSS B BTTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbbeeebbeeeebbbbeeeeebebbbeebbeeeebbeeebeeeeeeeeeeeeeeeebeeee:
Contact : b
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[assembly_id:1]
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