Protein Model on 6crw_C_1_A_1
(TEMPLATE: 
6crw
)Protein Model on 6crw_C_1_A_1
(TEMPLATE: 6crw
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1068 aa] | Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4 | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1068 aa] | Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4 | 304N 306R 342R 372T 376D 399P 444R 445H 449R 450P 451F 452E 453R 455I 502E 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 555V 556S 557D 558F 559T 560D 573I 575P 576C 577S(A) 578F 600D 601V 631T 632Q 651P 654A 655G 679M 681L 683A 684D 685S 686S 687I 688A 689Y 690S 691N 692N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 984Q 988T 995I 999E 1021R 1022V 1029Y 1054E 1061P 1071F 1072P 1073R 1076V 1089R 1090N 1103F 1105S 1111V 1112I (identity: 98.8 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6crw_C_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6crw_C_1 5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr : S B EEEEESB B SS S EEEEEEEE TTEEEEEEEE TTB EE TTEEEEEEEESS EEEEESS STTS EEEEE:
ExpBur :eeeebeeeeebeeeebebbebbbbbbeeeeeeeeeeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeeebbbbbb:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6crw_C_1 105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr :E SS EEEEEEEEEEEEEEEEEEBTTT EEEEEEEEEEEEEEEEEE S SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS B BE:
ExpBur :bebeebbbebbbbebbeebbbbbbeeebebeebebeeeeeeeeeeeebeeeeeebbeeeeebeebbbbbbbeeeeebbbbeeebebebeeebeeeeebbe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:*********************** **************************************************************************:
6crw_C_1 205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr :EEEEEE SEEEE B --- EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT SS SEEEE EEE EEE S:
ExpBur :eeeebebebebeebbbbbbbbbe---eebbbbbbbbbbebeebebbbebeeeeebeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbe:
Contact : b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:************************************************* ***********************************************:
6crw_C_1 305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCXXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr :S B TTTTS S STT EEEEE SB SHHHHS SSBS B ---- THHHH BS EEEEEEEE HHHHTT SSS TTHHHHTT B SS :
ExpBur :eebeeeebeebbebeebebbbebeeeebeebbbebebbeebeebeeeee----eebeeebbeeebbbbbbbbbbebbeebeeeeeebbbbebbbbbeeeb:
Contact : b b b b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:************************************************************************************* *********:
6crw_C_1 405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr : EEEEE TTTS BSS B S EEE SS BT S B TTS TTSTT B SEEE BBSSS GGGS EEEEEEEE ------ B SS :
ExpBur :bbbbbebbeeebbeeebbeeeebbebbeeebeebeebeeeebbbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbbbbe------ebbbebeee:
Contact : bb bbbbb b b
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:*********************************************************** ****************************************:
6crw_C_1 505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr : SSEEEEEETTEEEEEEEEE TT EE SSS EEE TTT EEEEE EE EEEEES TTT S EEEEET HHHHHHHHHTT EES:
ExpBur :ebeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeebbbbbeeeeebbebeebbeebbbbbbbbeeebeebbbbbeebebeebeebbeeebbee:
Contact : bbbb bbbbbbbbbbbbb b bbbb bb
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:********************************************** **********************************************:
6crw_C_1 605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr : SS TT EEEETTEEEES EEEEEEE SEEEETTEEEEEE -------- EEEEEEE S SSB EE SEEEEEEEEEEE EE:
ExpBur :ebeeeebeeeeeeeebbbbbebeebeeeeeeebebeeebbbbbeee--------ebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbe:
Contact : bb b bb b b bbbbbbbbbbbbb b
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:******************************************************************************************** :
6crw_C_1 705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr :E SIIIIISS HHHHHHHGGG THHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTS TTS SS HHHHHHTTT --------:
ExpBur :bebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeeeeeeeeeeeebebebbebebbbbeeeeeeeebebbeebbebbe--------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
:******* ***************************************************************************************:
6crw_C_1 805:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr : BEEE ------ EEE SSSEEE SS HHHHHHHHHHHHHHHTTTTHHHHHSS HHHHHHHHHHTTT THHHHHTHHHHHHHHHHHHHHHH:
ExpBur :eebeeee------eeeeeeebbbebeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:************************************************** ************************************************:
6crw_C_1 905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr :HHHHH SSSHHHHHHHHHHHHHHHHHHHTTS TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:
ExpBur :eebeeeeeebeebeebeeebeebbeebeeeeeeeeebebbebeebeeeeeeeebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbb:
Contact : b b b bbbb b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6crw_C_1 1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr : SSSTTSSSEEEEEEEEE SSEEEEEEEEEEE EE EEESEEEETTEEEEESSSEEEE SS EEEE SSS B TTSEEEEEESSSSSSEE :
ExpBur :ebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebeebbbbeeebbeeeeeebbeeeeeebbbeeebeeeeebeeebbeeeeebeeeeeebee:
Contact : bb b b b bbb b bb b b bb
queryA 1118:TVY:1120
:***:
6crw_C_1 1105:TVY:1107
SecStr : :
ExpBur :ebe:
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[assembly_id:1]
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