Protein Model on 6ack_C_1_A_1
(TEMPLATE: 
6ack
)Protein Model on 6ack_C_1_A_1
(TEMPLATE: 6ack
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1057 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 42Y 45E 46I 47F 48R 49S 110K 112Q 158N 189N 191D 192G 193F 223P 224L 225G 226I 227N 228I 269N 719D 721N 722M 727D 737Q 738Y 739G 740S 741F 744Q 758R 761R 769Q 770M 771Y 772K 832I 833C 834A 835Q 836K 837F 838N 843L 844P 845P 846L 848T 851M 855Y 865T 866A 868W 869T 871G 872A 875A 876L 877Q 878I 879P 882M 885A 886Y 889N 893V 894T 895Q 896N 899Y 900E 945V 949S 963L 964S 965R 966L 967D 970E 984Q 987Q 991T 994L 1009T 1013E 1021R (identity: 100.0 %/95.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ack_C_1 identity=95.9% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6ack_C_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S S EEEE TT SSS SEEEEEE S TT EEEEE BTTB EE SSEEEEEEESS EEEESSSSTTSEEEEEE:
ExpBur :eebebeeeeeeeeeebebeebbbbeebeeeeeeebeeeeeebbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:
Contact : b bbbbb b b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6ack_C_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSEEEEEEEE S SSS TT TT S EEEEEEE S SS EEEEEEEEEETTEEEE EE SSS :
ExpBur :beeebbbbebbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebebbbbbbbbeeeeebbbbebeeebeeeeeeeeeeebbe:
Contact : b b bbb
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6ack_C_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr : EEE EEEE B ---- B S EEEEEE EEEEEE SSS EEEEE SSS HHHHHHTTTT SS SEEEEEEEEE EEE :
ExpBur :eebebeeeeebeebbbbbbbbe----ebbbbebbbbbbebeebbbbbebbeebebeebbbbeebbbbbbbbeeeebebeebeeebeebeeeeebebebee:
Contact : bbbbbb b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:* ***********************************************************************************************:
6ack_C_1 318:NXXXXCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : ---- STTTTT S STT EEEEE SS TTTS SSEEEEEESSS STTSTTS BSSEEEEEEEEEGGGGGGSSSS SSGGGTS SSS :
ExpBur :e----eebeebbebeebebbbbbeeeebbeeebebeebeebeebebeebeebebeebeeeebbbbbbbbbbbbbebbebbbeeeeeebbbbbbbbbeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:*********************************************************************************************** *:
6ack_C_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGXXXXT: 517
SecStr : EEEEEE TTTS SS B SEEE SS TT BBTTB TTSTT B SEEE B TTS GGGSEEEEEEEE SSSS B ---- :
ExpBur :bbbbbbebeeebbeeebbeebeebeebeeebeebeebeeeeebbeeeeebeeeeeebeebbeebebeeeeeeeebbbbbbbbbbbeeeeeebbee----e:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6ack_C_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SS EEE SS EE EEE TT SSSS EEEETTTEEEEE S SEEEEEEEES SSS EEEE S SSHHHHHHHTT SS:
ExpBur :ebeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeeebbebbeeeebbbeeebbebbbbbbbbbbeeeeebbbbbeebebeebeebbeeeebeb:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6ack_C_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS S EE SSS EEET S SS BTTTB ------------- S SS B S B EEEEEEE EE:
ExpBur :eeeeeeeebebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------bbbbeebeeeeeeeeeeeeeeebbbebebebbebbbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6ack_C_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr : TTTSS SS SHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHT SS STT TTTS SSSS SS HHHHHHHHHS ------:
ExpBur :bebeebbbeeeeebeeebeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbbbeeebeee------:
Contact : b bb b bbbbb b b b bbbb
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6ack_C_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TT EE SS HHHHHHHHHHHHHHHHSS S SSSS SHHHHHHHTTTTT THHHHHTHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeebeeeebbbbbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebe:
Contact : bbbbbbb bbbb b b b bb bb bb bbbbb b bb b bbbb bb
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6ack_C_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTHHHHHHHHHHHHHHHHHHHHHHS SSS SSTTSGGGT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:
ExpBur :eebeeeeeebbebbebeeebeeeeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b b bbbbb b b b b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6ack_C_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTSSSSSS EEEEEEETTEEEEEEE B B SSB SSSSB SSS EETTTT EE SSS EE TTTS BSSSSS B S:
ExpBur :bbeeeeebeebebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbebeeeebbbbbeeeebbeebeebeeebbeeebeebeeeeeeebebee:
Contact : b
queryA 1118:TV:1119
:**:
6ack_C_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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