Protein Model on 6acg_C_1_A_1
(TEMPLATE: 
6acg
)Protein Model on 6acg_C_1_A_1
(TEMPLATE: 6acg
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1057 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 45E 46I 47F 48R 110K 112Q 160T 189N 191D 193F 223P 225G 226I 227N 228I 269N 719D 722M 727D 737Q 738Y 739G 740S 741F 744Q 747R 768K 769Q 770M 771Y 772K 774P 776L 779F 832I 834A 835Q 836K 837F 843L 844P 845P 846L 848T 851M 855Y 869T 872A 875A 876L 877Q 878I 879P 882M 886Y 889N 893V 894T 895Q 896N 899Y 900E 963L 964S 965R 966L 967D 983L 984Q 987Q 994L 998A 1009T 1013E 1088Q (identity: 100.0 %/95.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6acg_C_1 identity=95.9% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6acg_C_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : SS EEE SS B SS S EEEEEEEE TT EEEE SS EE S EEEEE SS EEEESS STT EEEEE:
ExpBur :eeeebebeeeeeeeeeebbebbbbeebeeeeeeebeeeeeebbebebebebbebeeebbbbeeeebeebbbbbbbbbbebbbbbbbbbebeeebebbbbb:
Contact : bbbb b b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6acg_C_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSEEEEEEE S EE SSS TT SS EEEEEEE S SSS EEEEEEEETTEEEEEE SSS BE:
ExpBur :beeebbbbebbbbebbebebbbbeeeebeeeeeebeeeeeeeebeeebeeeeeebeeeeeebebbbbbbbbeeebebebbebeeebeeeeeeeeeebbbe:
Contact : b b b b
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6acg_C_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEEEE SEEEE EE ---- S EEEE EEEEEEEEE SSS EEEEEESTT HHHHHHHHHT SS S EEEEEE EEE :
ExpBur :eeeebeeeeebeebbebbbbbe----ebbbeebbbbbbebeebebbbebbeeeebeebbbbebebbbebebeeeeeebeebeeeeeebeeeeeeebebee:
Contact : b bbbb b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:* ***********************************************************************************************:
6acg_C_1 318:NXXXXCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : ---- SSSSS S SSS EEEE S STTTTT SSEEEEE SSS STTSSS BEEEEEEEEEEEGGGTTTSSSS SHHHHT SSS :
ExpBur :e----ebbeebbeeeebeebebbeeeebeebeeebeebeeeeebebeebeebebeebeeeebbebebbbbbbbeebeebbbeeeeeebbbebbbbeeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:*********************************************************************************************** *:
6acg_C_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGXXXXT: 517
SecStr : EEEEE TTTS SS EE SS TT TTS TT TT SEE TT STT EEEEEEEEEE SSSS B ---- :
ExpBur :bbbbbbebeeebbeeeebeebeebebbeeebeeeeebeeeeebbeeeeeeeeeeeebeebbeebebeeebeeeebbbbbbbbbbbeeeeeebbee----e:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6acg_C_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SSEEEEE SS EEEEEEEE S TT B TT S EEEETTTEEEEEE EEEEEE SSS EEEESS SHHHHHHHHTT SS:
ExpBur :eeeeeebbebebeeeeeebebeebeeebeeeeebeeeeeeebebbebeeeeebebeeeebebbbbbbbbbeeebeeebbbbeebebeebeebbeeeeeeb:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6acg_C_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS S EEE STT EEET S SS TTT ------------- SS SS B SEE EEEEEEE EE:
ExpBur :eeeeeeeeeebeebeebbbbebeeeeebeebebebeeebbbee-------------bbbbeeeeeeeeeeeeeeeeeebebebebebeeebbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6acg_C_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr : HHHHSSSS SHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH SSS TTTS SSSS S HHHHHHHHH ------:
ExpBur :bebeebbbbeeeebeebbeeeeeebeebeeebeebeebbbebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbebeeeeeee------:
Contact : b b b bbbbb b b bbbbb b b b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6acg_C_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TTS EE SS HHHHHHHHHHHHHHHHSS SS SSS SHHHHHHTTTTTT HHHHTTSHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebbeebbeeeeeebbeebbebbeebe:
Contact : b bbbb bbbb b b b b b bbbbb b b b bbbb bb
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6acg_C_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTTHHHHHHHHHHHHHHHHHHHHT SSSS SSTTTHHHH SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:
ExpBur :eebeeeeeebbebeeeeeebbeeeeebeeebeeeeebebeebeebeeeeeeeebbeebeebbeebbeebeebbeebeeebeebeebbeebbebbeebbbb:
Contact : bbbbb bb b b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6acg_C_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTTSSSSS EEEEEEETTEEEEEEE EE B S SSSS SS TTTT EE SSS EE TTTS S SSS S:
ExpBur :bbeeeebbbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebbebeeebeeeebeeeeeeeeeebebee:
Contact : b
queryA 1118:TV:1119
:**:
6acg_C_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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