Protein Model on 6acg_B_1 (TEMPLATE: 6acg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1065 aa] Spike glycoprotein :SPIKE_CVHSA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6acg_B_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6acg_B_1      18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr          :     S       B    SS  EE SSS   SSEEEEEEEEE  TT   EEE   SS      EE TT EEEEEE SS     EEEBSSSSTT  BEEEE:    
ExpBur          :eebebeeeeeeeeeeeebbebebbeeeeeeeeeeeeeeebebbbbebebebbebeeeebbbeebebeebbbbbbbbbbbbbbbbbbbeebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6acg_B_1     118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr          :  SSEEEEEEB     S   EEE SSS   TT TT S   S  EEEEEEE     S   SSB  EEEEEEEEETTEEEEEEE   B  SSS      EEE:    
ExpBur          :beeebbbbbbbbbebbebebbebeeeeeeeeeebbeeeeeeeeeeeebeeeeeebbeeeeebebbbbbbbbeeeeebbebebeeebeeeeebeebeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************    **************************************************************************:
6acg_B_1     218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr          :EEEEE   S   EE    EEE ----     S  EEEEE EEEEEEEEE SSS EEEEEESTT HHHHHHHHHT SS   S EE   EEB    EEE   :    
ExpBur          :eeeebebeeebeebbbbbbbbe----ebebeeebbbbbebeebebbbebbeeeebeebbbbebbbbbebebeeeeeebeebeeeeeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
6acg_B_1     318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr          :    B THHHHSS S    STT   EE  S B  S TTTS SS SS EESSS STTSTT    S EEEEEEE SSHHHH SSS  TTGGGTT    SSS :    
ExpBur          :eeeeebebeebbeeeebebbbebbeeebeebebebeebeeeeebeeeebeeeeeeebeeebbbbbebbbbbbebebbeebeeeebeebebebbbbeeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
6acg_B_1     418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr          : EEEEEE TTTS  TT   S  EE   SS   SS        B TT     TTSTT B SEE     SS  TTTS EEEEEEE   SSSS  SB S    :    
ExpBur          :bbbbbbbbeeebbeeebbeeeebbebeeeebeeeeeeeeeeebbeeeeeeebeeeebeebbeebebeeeeeebebbbbbbbbbeeeeeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
6acg_B_1     518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr          :   BTS EEEE SS EEEEBB B  S   TT     SSSS   EEEETTTEEEE B   SEE EEEE   SSS    EEEESS  SSHHHHHHHHT BSS:    
ExpBur          :eebeeebbebbbbeeeeebbbbeeeeeeeeeeebeeeeeeebebbebeeeeebebeeebbebbbbbbbebeeeeeeebbbbeebebeebeebbeeeebeb:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*******************************************             ********************************************:
6acg_B_1     618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr          :  SS     EE  STT  EES  B SS  S SEEETTTEEEE ------------- EEES   S        SS B   SSEE  EE  EEE     EE:    
ExpBur          :ebeeeeeeebbeebeebbbbebeeeeeeeeeebebeeebbbbe-------------eebbeeeeeeeeeeeeeeeeeebbeebebebeeebebbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :**********************************************************************************************      :
6acg_B_1     718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr          :E HHHHS S  SHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH   SS         STT   TTTS  SSSSS S HHHHHHHHH    ------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbebeeeeeeeeeebeeeebebeebbbeeeeeeeebebbbbbeeeeeee------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :              **************************************************************************************:
6acg_B_1     818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr          :--------------     TTSEEE   SS HHHHHHHHHHHHHHHHSS S  SSSS     SHHHHHHHTTTTT  SHHHHTTHHHHHHHHHHHHHHHH:    
ExpBur          :--------------eeeeeeebbeeeeeebeeeeebebbbbbbbbbbebbeebeeeebeeeebeebbbebbeebeebeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
6acg_B_1     918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr          :HHHHS  STTTHHHHHHHHHHHHHHHHHHHHH   SSS SSTTTHHHH  STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:    
ExpBur          :eebeeeeeebbebeebeeebeebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6acg_B_1    1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr          :   SSSSSSSS  SEEEEEEETTEEEEEEE  EE     B B SSB SSSSB   SSS  EETTTT EE  SSS       STTS  BSSSSS  B    :    
ExpBur          :bbeeeeebbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeebbbebeeeebbbebeeeebbeebeebebebeeeebeeeeeeeeeebebee:    

queryA      1118:TV:1119
                :**:
6acg_B_1    1118:TV:1119
SecStr          :  :    
ExpBur          :ee:

Input Residue Numbers for Focused Sites

ex) 2,15,123