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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1020 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
2 | b | U 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 157F 158N (identity: 100.0 %/94.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zh1_B_1 identity=94.7% |
queryA 30:YTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACN: 129 :*********************************************** ****************************************************: 7zh1_B_1 37:YTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACN: 136 SecStr : EEEEESS EE SS SEEEEEEEEE TTEEEEEEEE SS EE SS EEEEEEESS EEEEEEESSSSSSS EEEEEE SS EEEEEEE: ExpBur :eeebebbebbbbeeeeeebbeeeeebebebbebeeebebbebeeeeeebeebebeebbbbbbbbeeebbebbbbbbebeeebebbbbbeeeeeebbebbb: queryA 130:FELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT: 229 :********** ***************** ****************************************************: 7zh1_B_1 137:FELCDNPFFAXXXXXXXXXXTMIFDNAFNCTFEYISDXXXXXXXXXXXNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT: 236 SecStr :EEE SS EE ---------- SEEEEEEEEEEEE ----------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEE : ExpBur :beebeebebe----------eebeeeeeeeeeeeeee-----------ebbebebbbbbeeeeebbbbebeeebeeeeebbeeeebbeeeeebebebebe: Contact : bb queryA 230:NFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVF: 329 :********* ************************************************************************************: 7zh1_B_1 237:NFRAILTAFXXXXXXXGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVF: 336 SecStr :EEEEEEE ------- EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT S SEEEEE EEEE SB HHHHH: ExpBur :ebbbbbbee-------ebeebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeeeebeebeeebeebeeeeeeebbbbeeeeeebebeebb: queryA 330:NATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNID: 429 :****************************************************************************************************: 7zh1_B_1 337:NATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNID: 436 SecStr :T S BSTT EEEEE S B GGGGT SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSSS SHHHHHT SS EEEEEEE HHHH: ExpBur :eeeebbbbeebeeeebeebeeeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeeb: queryA 430:ATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNF: 529 :****************************************************************************************************: 7zh1_B_1 437:ATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNF: 536 SecStr : BSS B EEE SS TT B TTS SSSTT B SEEE BBTTS GGGSEEEEEEEEEEESSS EE S SSEEEEEE: ExpBur :beeeeeeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbebbebeeeebebbbeeeeeeeeeeebbebbb: queryA 530:NGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVF: 629 :*************************************************************************** ************: 7zh1_B_1 537:NGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTXXXXXXXXXXXXXAWRIYSTGNNVF: 636 SecStr :TTEEEEEEEEE TT EEE TT EEEEE TTT EEEEE S EEEEES TTT S EEEETT ------------- S S S EE: ExpBur :bbeeeebebeebeeebeeeebbbeeeeeeeebbbbeeeeebbbbeebeebbbbbbbbbeeebeeebbbbeebebe-------------eeebeeeeeeee: queryA 630:QTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDST: 729 :******************************** **********************************************************: 7zh1_B_1 637:QTQAGCLIGAEHVDTSYECDIPIGAGICASYHXXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDST: 736 SecStr :E SS EEES EE SS B SEEEETTEEEEE ---------- EEEEEB TTEEEEEEEEEEEEEEEEEE EEEE HHHHTTTT H: ExpBur :ebeebbbbebeeeeeeeebebebeeebbbbee----------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebe: queryA 730:ECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINAR: 829 :****************************************************************************************************: 7zh1_B_1 737:ECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINAR: 836 SecStr :HHHHHHHTT HHHHHHHHHHHHHHHHHHHHHHH S S EETTEE TTSS SSSSSSS HHHHHHHHHS S S S HHHHHHT SS : ExpBur :ebeebbeeeeeeeeebeeebeebbeebeebbeebbeeeeeeeeeeeebebeebebeebbeeeeeeeebbebbbbbbeebeeeeeeeeeeeeebeeeeeee: queryA 830:DLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGK: 929 :*************************************** ********************************************************: 7zh1_B_1 837:DLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWXXXXXAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGK: 936 SecStr : HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHTT ----- HHHHHHHHHHHHT HHHHHHTHHHHHHHHHHHHHHHHHHHHS STT H: ExpBur :eeebebeeebbeeeeeeeeeeebbeebbbbbbbbbebbe-----eeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebee: queryA 930:LQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGY:1029 :****************************************************************************************************: 7zh1_B_1 937:LQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGY:1036 SecStr :HHHHHHHHHHHHHHHHHGGG SSSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSS SSE: ExpBur :beebbeebeebbbebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbeebbeeeebbbeee: queryA 1030:HLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVS:1105 :****************************************************************************: 7zh1_B_1 1037:HLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVS:1112 SecStr :EEEEEEEEETTEEEEEEEEEEEEEEEEEEEES B TTT EE SSSEEEE SSSEEEE SSS B TTTSEE : ExpBur :bbbbbbbbbbebbbbbbbbbeeeeeeebeebeeeeeeeeeeebeebbbbeeeeeebbbbebbbeeeeeeeeebeee: |