Protein Model on 5x5b_B_1_C_1 (TEMPLATE: 5x5b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein
2 b C 1 (C) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein 301Q 303S 342R 368G 369V 370S 372T 373K 383Y 416F 444R 450P 451F 452E 453R 454D 455I 458V 502E 503L 504L 505N 531G 533T 534G 535T 544R 546Q 548F 549Q 550Q 551F 552G 553R 554D 555V 556S 557D 558F 559T 560D 573I 575P 577S 578F 600D 601V 632Q 633A 651P 652I 653G 654A 655G 656I 679M 681L 682G 683A 685S 687I 688A 689Y 690S 691N 693T 694I 695A 939Q 943T 947Q 950S 951N 952F 984Q 988T 991T 992Q 995I 999E 1021R 1022V 1023D 1024F 1027K 1028G 1029Y 1054E 1056N 1061P 1071F 1072P 1076V 1089R 1103F 1104V (identity: 100.0 %/96.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x5b_B_1 identity=96.7%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x5b_B_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     S       EEEE SS  EE  SS    S EEEEEEEE  TT EEEEE  BTTB     EE  S EEE    SS    EEEEESSSSSSSEEEEE :    
ExpBur          :eeeebeeeeeeeeeebebbebbbbbbeeeeeeeebeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x5b_B_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :  SSEEEEEEEEE   SS    B SSS  B   TT S EEEEEEEEEEEE     S   SSEEEEEEEEEE  SS  EEEEEEEEEEESSS      EEE:    
ExpBur          :bebeebbbbbbbbebbebbbbebeeeebeeeeeebeeeeeeeeeeeebeeeebebeeeeeebeebebbbbbeeeeebbbbebeeebebeeebeeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     *************************************************************************:
5x5b_B_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEE        EEEEE   B ----     S  EEEEE EEEEEEEEE SSS EEEEEETTT HHHHHHHHHT SS  SEE          B     S :    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeebebeebeeebeebbeeeeebebbeb:    
Contact         :                                                                                   b b              

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
5x5b_B_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :SS EE STHHHHS S    STT EEEE  SEE  HHHHHHS   SB    SS HHHHTT   S  EEEEEEEEGGGSTTSSSS TTSSTTTSS   SSS :    
ExpBur          :eeeeeebbeebbeeeebebbbebeeeebeebbbebeebeeeeebeeeeeeebebeebeebbbbbbbbbbbbbebebbebbbbbeeeeebbebbbbbeeee:    
Contact         :                        b                         bbb bb         b                                b 

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
5x5b_B_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 504
SecStr          :  EEEEE TTTT  TT  TTS  B   SS   TT        B SS  B  TTSTT   SB      TTS GGGSEEEEEEEE   S SS  S  S    :    
ExpBur          :bbbbbbebeeebbeeebeeebebbeeeeeebeeeeeeeeeebbbeeeeebeeeeeebeebbeeebbeeebeeeebbbbbbbbbbeeeeeebbbbbeeeee:    
Contact         :                          b     bbbbbb  b                                           bbbb            

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x5b_B_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :   SSS B   TTS     B  B      TT  EE  TTS   EEE TTT  EEE B        EEE  TTT     EE  SS HHHHHTTTTTT SSS:    
ExpBur          :eeeeebbbebbbbeeeeebebeeeeeebeeeebbbeeeeeeebbbbbbeeeeebebeebbeeebbbbbbbbeebeeebbbbbeeebeebeebeeeebbeb:    
Contact         :             b bbb        b b bbbbbbbbbbbbb            b b bb                     bb                

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x5b_B_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    SS    SSS   SSB  S     SEE SSSEEEES  ---------   EEEE   S        SS  EEE  B   EEEEEEE    EEE:    
ExpBur          :ebeebeeeeeeeebeebbbbbbeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbb:    
Contact         :              bb                 bbbbbb                      b bbb b bbbbb bbb                      

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x5b_B_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E HHHHHHSS HHHHHHHHTS STTTHHHHHHHHHHHHTTHHHHHHHTTSSS     S   SSS   TTS  TTT SSSS HHHHHHTTS  --------:    
ExpBur          :bebeebbbeebebbeebbeeeeeeeeebeebbeebbebbbebbeebbeebeeeeebeeeeebebbebebbbeeeeeeeebbebbebbbeeee--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :             ***************************************************************************************:
5x5b_B_1     805:XXXXXXXXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :-------------      TT EEEE  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHTS HHHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :-------------eeeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeebeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x5b_B_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HTTTSS SSSHHHHHHHHHHHHHHHHHHHTTS  SSSS S HHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS:    
ExpBur          :eebeeeeebeeebbebeeebeebeeebeeebeeeeebeebebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbb:    
Contact         :                     b   b   b  bbb                               b   b  bb  b   b                  

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x5b_B_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTSSSSSEEEEEEEEETTEEEEEEEE  B  EEE EE SS   SSS  EESS   EEETTEEEEEETTEEEEEE  TTTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeeebeeeeeeeeeeebbbbeeeeeebbbbebbebeeeeeeebbee:    
Contact         :   bbbb  bbb                        b b    b         bb   b            b             bb

Input Residue Numbers for Focused Sites

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