Protein Model on 8tc1_B_1_A_1
(TEMPLATE: 
8tc1
)Protein Model on 8tc1_B_1_A_1
(TEMPLATE: 8tc1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1088 aa] | Spike glycoprotein :Q3ZTF3_SARS | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1088 aa] | Spike glycoprotein :Q3ZTF3_SARS | 54L 56Q 289S 291K 301Q 303S 304N 342R 368G 369V 370S 372T 373K 377L 381N 383Y 390K 392D 395R 401Q 402T 403G 404V 407D 417M 442Y 447K 449R 450P 451F 453R 455I 456S 479N(R) 489I 491Y 502E 504L 506A 531G 533T 537V 542S 543K 544R 545F 546Q 548F 549Q 551F 552G 553R 554D 555V 556S 557D 560D 572D 574S 575P 576C 577S 578F 599Q 600D 602N 620R 651P 654A 655G 679M 681L 682G 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 969V 984Q 985S 988T 991T 999E 1021R 1022V 1023D 1028G 1029Y 1054E 1059T 1061P 1071F 1072P 1073R 1074E 1089R 1103F 1105S 1112I (identity: 99.1 %/96.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8tc1_B_1 identity=96.9% |
queryA 16:LDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVI: 115
:************************************************************* **************************************:
8tc1_B_1 1:LDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVI: 100
SecStr : S SS B EEEE S B SS SEEEEEEEEE TT EEEEEEEETTEE EE TT EEEEEEESS EEEEESSSSTTS EEE:
ExpBur :eebeeebeeeeeeeeeebebbebbbbbbeeeebbeeeeebeeebbbbebebbbbbbeeeebbbbebebeebbbbbbbbbbbbbbbbbbbbebeeebbbbb:
Contact : b b
queryA 116:IINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNT: 215
:*********************** ****************************************************************************:
8tc1_B_1 101:IINNSTNVVIRACNFELCDNPFFVVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNT: 200
SecStr :EEE SS EEEEEEEEEE SS EEEEETTTTEEEEE SEEEEEEEEEEEE S SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS :
ExpBur :bbeebebebbebbbbebbebbbbbbbeeeeebeeebbeeebeeeeeeeebeeeeeebeeeeeebeebebbbbbeeeeebebbebeeebeeeeebbeebeb:
queryA 216:LKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVR: 315
:*********** *************** ***********************************************************************:
8tc1_B_1 201:LKPIFKLPLGIKITNFRAILTAFSPAQGTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVR: 300
SecStr :BEEEEEEE EEEEEEEEEESSSS B EEEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHT S SEEEE EEEE:
ExpBur :beeeeebebebebeebbbbbbbbbeeeeeebbbbbbbbbbebeebebbbebbeeeebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeeeebbb:
Contact : b b b bb
queryA 316:FPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDD: 415
:**************************** *************** *******************************************************:
8tc1_B_1 301:FPNITNLCPFGEVFNATKFPSVYAWERKRISNCVADYSVLYNSTSFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDD: 400
SecStr : SB HHHHHT S BGGG EEEEE SEE GGGGGGT SEEEEESS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT SHHHHHT TT:
ExpBur :bbebeeebebeebbeeeebbbbebbeeeebeebebeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbbebbebbbeeeebebbbebbebbee:
Contact : b bbb bb b b b b b b bbbb b
queryA 416:FMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKL: 515
:********************************************** ********* ****** ****** ****************************:
8tc1_B_1 401:FMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSSDGKPCTPPAPNCYWPLRGYGFYTTSGIGYQPYRVVVLSFELLNAPATVCGPKL: 500
SecStr : EEEEEEE HHHH BTT B EEE SS TT B TT S SSSTT B SEEE BBTT GGGSEEEEEEEEEEESSS EE S :
ExpBur :bebbbbbbebeeebbeeebbeebebbeeeeeebeeeeebeeeebbbeeeeeeeeeeeebeebbebbebeeeeeebebbbbbbbebbebeeeebebbbeee:
Contact : b b b bbb b bb b b b b b b
queryA 516:STDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQL: 615
:********************************************************************************************* :
8tc1_B_1 501:STDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTLXXXXXX: 600
SecStr : SS EEEEETTEEEEEEEEE TT EEE TT EEEEE TTT EEEEE S EEEEES TTT S EEEETT SS ------:
ExpBur :eeeeeeeebbebbbbbeeeebebeeeeeebeeeebbbeeeeeebbbbbbbeeeebbebeebeebbbbbbbbbeeeeeeebbbbeebebeeeeee------:
Contact : b b b bbbbb bb bbbbbbb b b bbbbb bb b
queryA 616:TPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAK: 715
: ********************************************** *********************************************:
8tc1_B_1 601:XXAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAK: 700
SecStr :-- S S SS EEETTEEEES EE S SEEEETTEEEEEEE ------- EEEEEEE S SSEEEEEEEEEEEEEEEEEE E:
ExpBur :--eeebeeeeeebbebebbbbbebbeeeeeeeeebebeeebbbbbeee-------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbb:
Contact : b b bb b bbbbb bbbbb bbb b
queryA 716:TSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGF: 815
:*************************** ********************* ************ *************************************:
8tc1_B_1 701:TSVDCNMYICGDSTECANLLLQYGSFCRQLNRALSGIAAEQDRNTREVFVQVKQMYKTPTLKDFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGF: 800
SecStr :EEE HHHHHHTT HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH SS S TTT GGGS SSSS SS HHHHHHHHTS S SSS:
ExpBur :bebebeebbbeebeebbeebeebeeebeebeebbeebbeebbbbbeebbeebeeeeeebeebebeebebeebbbeeebeeeebebbbbbbeebeeeeeee:
queryA 816:MKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQ: 915
:****************************************************************************************************:
8tc1_B_1 801:MKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQ: 900
SecStr : HHHHTT GGG HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTSTTSSS HHHHHHHHHHTTT HHHHHHTHHHHHHHHHHHHHH:
ExpBur :eeeeeebeeeeeeeeeebebeeebbeeeeeebeeeebbebbbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbee:
queryA 916:IQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECV:1015
:****************************************************************************************************:
8tc1_B_1 901:IQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECV:1000
SecStr :HHHHHHS TTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT:
ExpBur :beeebeeeeeebeebbebbeebeebbeebeeebeeeeebebbebeebeeeeeeebbeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebb:
Contact : b b b bbbb b bb b b b
queryA 1016:LGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGII:1115
:**************************************************************** *********************************:
8tc1_B_1 1001:LGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFSXXSWFITQRNFFSPQIITTDNTFVSGNCDVVIGII:1100
SecStr :SS STTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEE SS EEEE -- EEEE TTS EE TTT EEEEESSSSTT E:
ExpBur :bebbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeebbbeeeebbbbee--ebbbbbeebbeeeebeeebbeeeeeeeebeebe:
Contact : bbb bb b b b bbbb b b b b
queryA 1116:NNTVY:1120
:*****:
8tc1_B_1 1101:NNTVY:1105
SecStr :E :
ExpBur :eeebe:
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[assembly_id:1]
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