Protein Model on 8h12_B_1_A_1
(TEMPLATE: 
8h12
)Protein Model on 8h12_B_1_A_1
(TEMPLATE: 8h12
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1007 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1007 aa] | Spike glycoprotein :SPIKE_SARS | 45E 47F 110K 112Q 158N 189N 191D 192G 193F 221K 223P 225G 226I 227N 269N 353S 356Y 357N 360F 361F 362S 371A 400G(C) 426R 489I 717S 722M 727D 737Q 738Y 739G 740S 741F 744Q 747R 768K 769Q 770M 771Y 772K 779F 834A 836K 837F 838N 843L 844P 845P 846L 848T 851M 855Y 865T 866A 871G 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 945V 948L 949S 957S 958V 960N 963L 964S 965R 966L 967D 976D 987Q 991T 994L 1001R 1009T 1012S 1013E 1016L 1021R (identity: 98.9 %/91.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h12_B_1 identity=91.9% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h12_B_1 17:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 116
SecStr : EEEE S B SSS S EEEEEEEE TTEEEEEE ------- EE SS EEEEEEESS EEEEEEESSSSSSS EEE B SS B EE :
ExpBur :eebebbebbbbbbeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbbbeeeeeeebbebbbb:
Contact : b b b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:** ************ ***************************************************:
8h12_B_1 117:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 216
SecStr : ---------------------- S B B ------------- EEEEEEEEEETTEEEEEEEEE S SS B EEEEEE E:
ExpBur :ee----------------------eeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebebebeeeeebeeeeeebeeeeebebebebee:
Contact : b b bbb b b bbb
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:****** *********************************************************************************:
8h12_B_1 217:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 316
SecStr :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS SEEEE S EEEE S B HHHHSS:
ExpBur :bebeee-------------ebbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeebeeebbeeeeebbbbeebeeebebeebbe:
Contact : b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:********************************************************************* ******************************:
8h12_B_1 317:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPCQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 416
SecStr : S GGG EEEEE SSB STTTTT SEEEEESS GGGSSS B S EEEEEEEE GGGGGGSSSS SSHHHHT TT EEEEEEE TTT :
ExpBur :eeebbbbeebeeeebeebbbebeebeeebeeeeeebeebeeeebeebbbbbbebbbbbbbbebbebbbbeeeeebbbebbbbbeebebbbbbbebeeebb:
Contact : b bb bbb b b b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h12_B_1 417:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 516
SecStr : SS BTT EEE SS TT B TTS TTSTT B SEEE B SSS GGGS EEEEEEE SS B SS BEEEES:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbeeeeeeeebbbeeeeeeeeeeebbebbbb:
Contact : b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h12_B_1 517:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 616
SecStr :S B BEEEE TT EE SSS EEE TTT EEEEE SS S EEEEES TTT S EEEEET GGGHHHHHTGGGS TTTGGGTSSS EEE:
ExpBur :eeeeebbbeeeeeebeeebbbbeeeeeebebbbbbeeeebbebeebeeeebbbbbbbeeeeeebbbbbeeeebeebeeebbbeebeebbeebbeeeeebe:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ***********************************************************:
8h12_B_1 617:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 716
SecStr :ETTEEEES EE SS B SEEEETTEEEEEE --------- EEEEEEB S TT EEEEEEEEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:****************************************************************************** :
8h12_B_1 717:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXX: 816
SecStr :HHHHHTTSTTSSHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTSS SSSS SS HHHHHHTS ----------------------:
ExpBur :bbebbeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeeebebbebbbebe----------------------:
Contact : bbbbb b b bbbbb b
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h12_B_1 817:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 916
SecStr : HHHHHTTTEEEE SS HHHHHHHHHHHHHHHHHB SSSSSSS B HHHHHHHHHHTTT THHHHHTHHHHHHHHHHHHHHHHHHHHH S TTHHH:
ExpBur :eeeebeeebbeeeeeeeeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbebbeebbeebbeebeeeeeebeeb:
Contact : b bbb bbbb b b b bb bb bbbbbb b b bb bb
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************** *************************************************************:
8h12_B_1 917:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKCEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1016
SecStr :HHHHHHHHHHHHHHHHTTS TTSS S HHHHTTSS TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebeeebeeebeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbbbeeeebbbeeeb:
Contact : b bb bb b bbbbb b b b b b b bb b b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h12_B_1 1017:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1109
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEE S EESSS EEEESSSEEEE SS EEEE SSS B BSTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbeeeeebebbbebbbeeeebbeeebeeeeeeeeeeeeeeeebeeee:
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[assembly_id:1]
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