Protein Model on 8h0z_B_1_A_1
(TEMPLATE: 
8h0z
)Protein Model on 8h0z_B_1_A_1
(TEMPLATE: 8h0z
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (A) | polymer(polypeptide(L)) [1022 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | A 1 (B) | polymer(polypeptide(L)) [1045 aa] | Spike glycoprotein :SPIKE_SARS | 54L 56Q 301Q 303S 304N 342R 368G 369V 370S(C) 373K 383Y 392D 395R 401Q 402T 403G 404V 407D 408Y 442Y 447K 450P 451F 452E 453R 455I 456S 479N 489I 491Y 503L 504L 505N 506A 531G 533T 534G 537V 539T 543K 544R 545F 546Q 548F 549Q 551F 552G 553R 554D 555V 556S 557D 560D 572D 574S 575P 576C 577S 578F 599Q 600D 601V 602N 620R 630Q 633A 651P 653G 654A 655G 679M 681L 683A 684D 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 947Q 950S 951N 952F 953G 968K 969V 988T 992Q 995I 999E 1021R 1022V 1023D 1028G 1054E 1056N 1059T 1061P 1071F 1072P 1076V 1089R 1103F 1105S 1110V (identity: 99.1 %/93.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h0z_B_1 identity=93.3% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h0z_B_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEE SEEEE S S EEEEEE TTEEEEEE ------- EE TT EEEEEEESS EEEEEEES SSSSS EEEEEE SS EEEEEE :
ExpBur :eebebbebbbbeeeeeeeeeeeeebeeebbbbebebebee-------eeebebeebbbbbbbbeeeebbbbbbbeebeeebebbbbbeeeebbebebbbb:
Contact : b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:******** ******************* ***************************************************:
8h0z_B_1 121:ELCDNPFFXXXXXXXXXXXTMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : B SS B ----------- BS S EEEE ----------- EEEEEEEEEETTEEEEEEEEE SSS EEEEEEEEE E:
ExpBur :ebeeebeb-----------eebeeeeeeeeeeeebeee-----------ebbebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h0z_B_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ----------- EEEEEE EEEEEEEEE SSS EEEEEESSS HHHHHHHHHT S SEEEEE EEEE SB HHHHTS:
ExpBur :bbbbeee-----------ebbbbbbebeebebbbebeeebebeebbbbeeebbbbbbbeeeeeebeebeeebeebeeeeeeebbbbeebeeebebeebbe:
Contact : b bb
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h0z_B_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGGSSS SEEEEESS SGGGSS EES EEEEEEEE GGGGGGSSTT SHHHHHT TT EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbeeeeebeeeeeeeeeebeeeeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : b bbb b b b b bbbb bb
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h0z_B_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr : TT TT EEE SS TT B SSS TTSTT B SEEE SSS GGGS EEEEEEE SSS EE SSEEEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeeeebbbbbbbebbebeeeebebbbeeeeeebeeeebbebbbb:
Contact : b b bbbb bb b b b bbbb
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:************************************************************************** ************:
8h0z_B_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TT EEEEE TTT EEEEE S EEEEES TTT S EEEETT -------------- S S EEE:
ExpBur :bbeeebbbeeeeeebeeeebebeeeeeeebbbebeeeeebbebeebeebebbbbbbbeeeeeebbbbbeeeebe--------------eeeeeeeeeebe:
Contact :b bb b b bbbb bb bbbbbbb b b bbbbb bbbb b b
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h0z_B_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SS EEES EE SS SEEEETTEEEEEE -------- EEEEEE TTEEEEEEEEEEEEEEEEEE EEEE HHHHHTTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbebebeebbbeebee:
Contact : b b bbb b b bbbbbbbbb bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:******************************************************************************** ********* **:
8h0z_B_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXGFMKQYGECXXXXXXRD: 820
SecStr :HHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTT SS S EETTEE GGGS SSSSSSS HHHHHHHHHS --- SS ------ :
ExpBur :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeebbebbbbbbeebee---eeeeeeeee------ee:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h0z_B_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHTTSTTTTTTSS HHHHHHHHHHHTT THHHHTTHHHHHHHHHHHHHHHHHHHHS SSSSHHH:
ExpBur :ebbebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbeebbeebeeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h0z_B_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbebeeeebbbeeeb:
Contact : b b bbbb bb b b b b bbb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h0z_B_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SSSEEEE SSS B BSTTEEE S SSSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbebbbeeeebbeeebeeeeeeeeeeeeeeeebeeee:
Contact : b b b b bb b b b b b
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[assembly_id:1]
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