Protein Model on 6ack_B_1_A_1
(TEMPLATE: 
6ack
)Protein Model on 6ack_B_1_A_1
(TEMPLATE: 6ack
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 304N 306R 342R 368G 369V 370S 372T 373K 377L 383Y 444R 449R 450P 451F 452E 453R 454D 455I 456S 503L 505N 533T 543K 544R 548F 549Q 550Q 551F 552G 553R 556S 557D 558F 574S 575P 578F 600D 601V 632Q 651P 653G 654A 655G 679M 681L 682G 683A 684D 685S 687I 689Y 691N 693T 694I 695A 697P 943T 947Q 950S 951N 952F 953G 968K 984Q 988T 995I 999E 1021R 1022V 1024F 1028G 1029Y 1049Y 1050V 1051P 1056N 1061P 1071F 1072P 1074E 1075G 1076V 1077F 1089R 1103F 1105S 1110V 1112I (identity: 100.0 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ack_B_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6ack_B_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S EEE TT SSS SS EEEEEEE TT EEEEE BTTB EE SSEEEEE SS S EEEESSSSTT EEEEEE:
ExpBur :eeeebeeeeeeeeeeeebbebbbbebeeeeeeeebeebebebbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeebebbbbb:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6ack_B_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSSEEEEEEE S EE SSS TT TT S EEEEEEEE S S SS EEEEEEEETTEEEEEEE SSS S E:
ExpBur :beeebbbbbbbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebbeeeeebeebbbbbbbbeeeebbbbebeeeeeeeeebeebebbbe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6ack_B_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEE S EEEE EE ---- S EEEEE EEEEEEEEE SSS EEEEEESTT HHHHHHHHHT SS SEEEEEEE B EE :
ExpBur :eebebebeeebebbbbbbbbbe----ebbbbebbbbbbebeebebbbebbeebebeebbbbebebbbebebeeeeeebeebeeebeebebeeebebbbbe:
Contact : b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
6ack_B_1 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : SHHHHTT S STT EEEEE S B TTTSS S S EESSS STTGGGS BS EEEEEEEE TTTTTT SSS TTHHHHT SS :
ExpBur :eeeeebebeebbebeebbbbbebeebebeebebebeebeeeeebeeeebeeeeeeebbeebbbbbbbbbbbbebebbeebbeeeeeebbbebbbbbeeeb:
Contact : b bbb bb b b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
6ack_B_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr : EEEEEE TTTTS TT S EE SS SS BTTB TTSTT EE TT GGG EEEEEEEE SSS BB S :
ExpBur :bbbbbbbbeeebbeeebbeeeebbeeeeeebeeeeeeeeeeebbeeeeebebeeeebeebeeebebeeebeeeebbbbbbbbbbeebeeebbbbbeeeee:
Contact : b bbbbbbbb b b
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6ack_B_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SSSEEEEE SS EEEEEEEE TT SSSS EEETTTEEEEEE SB EEEEEE SSS EEE SB SSHHHHHHHTT BSS:
ExpBur :eeeeeebbebbbbebeeebbbeebeeebeeeebeeeeeeeebebbebbeeeebebeeebbebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:
Contact : b bb bbbbbb bbb bb b bb
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6ack_B_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS B SSS EET S SEEETTTEEEB ------------- B SS SS B EE EEEEE EE:
ExpBur :ebeeeeeebebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------bebbeeeeeeeeeeeeeeeeeebebeeebebeeebbbbbbbbbe:
Contact : b b bbb b bbbbb b b b bbb b
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6ack_B_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr :E TTTSSS S SSHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTT S S SSS TTTS TTSSSSS HHHHHHHHT ------:
ExpBur :bebeebbbeeeeebbebbeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbbbeeeeeee------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6ack_B_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TTSEEE SS HHHHHHHHHHHHHHHHSS S SSSSS SHHHHHHHHHTTT THHHHTSHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeeeeeeebbebbbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeeebeeebeebbeebbebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6ack_B_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHT STTHHHHHHHHHHHHHHHHHHHHHHS SSS SSHHHHHHT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:
ExpBur :eebeeeeeebeebeebbeebbeeeeebeeebeeeeebebbebeebbeeeeeeebeeebbebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b b bbbb b b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6ack_B_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTSSSSS EEEEEE SSSEEEEEE EE BB SS SSS SSS BSTT SSS SSSS S TTS S :
ExpBur :bbeeeeebbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebeebeeebeeebbeebeebeeeebebee:
Contact : bb b bb bbb b b bb bbbb b b b b b
queryA 1118:TV:1119
:**:
6ack_B_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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