Protein Model on 6ack_A_1 (TEMPLATE: 6ack )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1065 aa] Spike glycoprotein :SPIKE_CVHSA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ack_A_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6ack_A_1      18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr          :     S       EEEEE S   B SSSS   S EEEEEEEE  TTEEEEEB   SS     EEE SS EEEEEEESS S   EEEESSSSTTEEEEEEE:    
ExpBur          :eeeebeeeeeeeeeebebbebbbbeebeeeeeeebeeeebebbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6ack_A_1     118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr          :E SSEEEEEEEEE   S   EEE SSS   TT TT    SSEEEEEEEEE     S   SSB EEEEEEEEEETTEEEEEE    B  SSS  S    BE:    
ExpBur          :beeebbbbebbbbebbebbbbbbeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebeeeeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************    **************************************************************************:
6ack_A_1     218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr          :EEEEE       EEEE  EEE ----     S  EEEEE EEEEEEEEE TTS EEEEEESSS HHHHHHHHHT SS  SS EE S EE    EE     :    
ExpBur          :eeeebebeeebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebbeeeebeebbbbebebbbebebeeeebebeebeeebeebebeeebebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
6ack_A_1     318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr          :S   B THHHHTS S    STT EEEEE S B  S TTTS    S EEESSS SGGGGGS BS EEEEEEEE SSTTTT SSS   SHHHHTS   SSS :    
ExpBur          :eeeeebebeebbeeeebebbbebbebebeebebebeebeeeeebeeeeeeeeeeeebeeebbbbbbbbbbbbbbebbeebeeeeeeebbbebbbbeeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
6ack_A_1     418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr          : EEEEEE TTTT  TT  TT EEE   SS   SS          TTS    TTSTT    EEE    TT  TTTS EEEEEEE  TT SS  BB S    :    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeebeeeeeeebbeeeeeeeeeeeebeebbeebbbeeebeeeebbbbbbbbbbeeeeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
6ack_A_1     518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr          :   TTS EEEE SS EEEEEEEE      TT SB  TTTT   EEEETTTEEEEEE    EE  EEB   SSS    BB   S  SSHHHHHHHTT  SS:    
ExpBur          :eeeeeebbebbbbebeeebebeebeeebeeeebeeeeeeeeeebbebeeeeebebeeebbebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*******************************************             ********************************************:
6ack_A_1     618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr          :  SS      EE STT EEBT EE  S    SEE SSS EEE ------------- EEE    S        SS B     EE  EEEEEEE     EE:    
ExpBur          :ebeeeeeebebeeeeebbbbbbeeeeeeeeeebebeeebbbbe-------------bbbbeeeeeeeeeeeeeeeeeebebebebebeebbbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :**********************************************************************************************      :
6ack_A_1     718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr          :E TTTSS  S SHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHH   S          STT   TTTSB TTSSS  BHHHHHHHHHS   ------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeeeeeeeeeeeeeebebbebeebbbeeeeeeeebebbbbbeeebeee------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :              **************************************************************************************:
6ack_A_1     818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr          :--------------     SSSEEE   SS HHHHHHHHHHHHHHHHSS S  SSSS     SHHHHHHHHHTTT  SHHHHTTHHHHHHHHHHHHHHHH:    
ExpBur          :--------------eeeeeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeebeeeebbebbbebbeebebeeebbeeebeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
6ack_A_1     918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr          :HHHHS  STTHHHHHHHHHHHHHHHHHHHHHH  SSSS SSTTTHHHH  STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :eebeeeeeebeebeebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbeb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6ack_A_1    1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr          :   SSSSSSSS  SEEE  EETTEEEEEEE  EE     B   SSEESSS EE  SSSS EE SSS EE  SSS   B  SSSS    SSS S S     :    
ExpBur          :bbeeeebbbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebeeeeeebeeeebeeeeeeeeeebebee:    

queryA      1118:TV:1119
                :**:
6ack_A_1    1118:TV:1119
SecStr          :  :    
ExpBur          :be:

Input Residue Numbers for Focused Sites

ex) 2,15,123