Protein Model on 6acg_A_1 (TEMPLATE: 6acg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1065 aa] Spike glycoprotein :SPIKE_CVHSA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6acg_A_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6acg_A_1      18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr          :     S        EEEESS  EE  SS    SEEEEEEEEE  TTEEEEE   BTTB     EE  SSEEEEE  SS  S  EEEESSSSTTSEEEEEE:    
ExpBur          :eebeeeeeeeeeeeeeebeebebbeeeeeeeeeebeeeebebbebebebebeebeeeebbbeebebeebbbbbbbbbbbbbbbbbbbeeeeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6acg_A_1     118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr          :ESSSEEEEEEEE    SS  EEE SSS   TT        S  EEEEEEE         SS    EEEEEEEETTEEEEEE       SSS      EEE:    
ExpBur          :beeebbbbebbbbebbebbbbbbeeeeeebeeeebeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeebebbbbebebebeeeeeeeebeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************    **************************************************************************:
6acg_A_1     218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr          :EEEE    S   EEEE  EEE ----     S   EEEE EEEEEEEEE SS  EEEEEESTT HHHHHHHHHT SS  SS EEEEEEEB    EEE   :    
ExpBur          :eeeebeeeeeeeebbbbbbbbe----ebbbeebbbbebebeebebbbebbeeeebeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
6acg_A_1     318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr          :    B THHHHSS S    STT    EE S B   HHHHS SS SEEEESSS SGGGTT  B SEEEEEEEE SSHHHHSSSS   STTTSS    SS  :    
ExpBur          :eeeeebebeebbeeeebebbbebeeeebeebebebebbeeeeebeeeebeeeeeeebeeebbbebbbbbbbbbbebeeebeeeeeeebbbebbebbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
6acg_A_1     418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr          : EEEEEE TTTS  TT  TT EEE   SS   TT    S   B TTS    TTSTT B  EEE    SS  STTS EEEEEEE  TT SS  BB S    :    
ExpBur          :bbbbbbbbeeebeeeebbeeeebbeeeeeebeeebeeeeeeebbeeeeebebeeeebeebeeebebeeebeeeebbbbbbbbbbeeeeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
6acg_A_1     518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr          :    SS EEEE SS EEEEEEEE  S   TT      SS    EEEETTTEEEEEE   SEEEEEEE   SSS    EEEESS  SHHHHHHHHHT BSS:    
ExpBur          :eeeeeebbebbbbeeeeebebeeeeeebeeeebbeeeeeeebebbebeeeeebebeeeeeebbbbbbbebeeeeeebbbbbeebebeebeebbeeeebee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*******************************************             ********************************************:
6acg_A_1     618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr          :  SS      B  STT  EES  B  S    SB  TTT EEE ------------- EEE    S        SS B   SSEE      EEE     EE:    
ExpBur          :ebeeeeeebbbeebeebbbeebeeeeeeeebebebeeebbbee-------------eebbeeeeeeeeeeeeeeeeeebbeebebebeebbbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :**********************************************************************************************      :
6acg_A_1     718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr          :E HHHHS S  SHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH   SS        EETTEE TTTS  SSSS  S HHHHHHHHT    ------:    
ExpBur          :bebeebbbeeeeebeebeeeeeeebeebeeebeebbeebeebbeebbeeeeeeeeeeeeeeeebbebeebbbeeeeeeeebebbbbbeeeeeee------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :              **************************************************************************************:
6acg_A_1     818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr          :--------------     TT EEE   SS HHHHHHHHHHHHHHHHSS S  SSSS     SHHHHHHTTTTTT  SHHHHHTHHHHHHHHHHHHHHHH:    
ExpBur          :--------------eeeeeebebeeeeeebeeeebbeebbbbbbbbeebbeebeeeeeeeeebeebbbebbeebebeeeebeebeeebbebbbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
6acg_A_1     918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr          :HHHHS  STTTHHHHHHHHHHHHHHHHHHHHT   SSS SSTTHHHHH  STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS:    
ExpBur          :eebeeeeeebbebeebeeebeeeeeebeeebeeeeebebeeeeebeeeeeeeebbeebeebbebbbeebeebbeebeeebeebeebbeebbebbeebbeb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6acg_A_1    1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr          :   STTTSSSS  S  EEEEETTEEEEE    EE     B  BSSB SSSS EE  SS  EETTTT EE  SSS   B   TTTSEE   SSS  B    :    
ExpBur          :bbeeeeebbebebbbbbbbbbeebbbbbbbbbebeeeeeeebbebbbeeeebbebeeeebbbebeeeebbeebbebeeebbeeebeebeeeeeeebebee:    

queryA      1118:TV:1119
                :**:
6acg_A_1    1118:TV:1119
SecStr          :  :    
ExpBur          :be:

Input Residue Numbers for Focused Sites

ex) 2,15,123