Protein Model on 5x5b_A_1 (TEMPLATE: 5x5b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1033 aa] Spike glycoprotein
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x5b_A_1 identity=94.8%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x5b_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     SS      EEE  TT  EE  SS    SEEEEEEEEE  SS  EEEE   SS      EE  S EEEEE  SS  EEEEEEESSSSSSSEEEEEE:    
ExpBur          :eeeebeeeeeeeeeeeebbebbbbbbeeeeeeeeeeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x5b_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SSEEEEEEEEE   SS    B TTT       S   EEEEEEEEEEEE     S   SS S  EEEEEEEETTEEEEEEEE     SSS      EEE:    
ExpBur          :beeebbbbbbbbbebbebbbbebeeeebeeeeebbeeeeeeeebeeebeeeebebbeeeeebeebbbbbbbeeeeebbbbebebebebeeebeeeeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     ***********************************************************************  :
5x5b_A_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRXX: 304
SecStr          :EEEE        EEEEEE  B ----     S  EEEEE EEEEEEEEE SSSSEEEEEETTSSHHHHHHHHHT S   SEE          B     --:    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeeeeebbeeeeebbbe--:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :    ************************************************************************************************:
5x5b_A_1     305:XXXXLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :----  GGGTTTT S    STT EEEEE S    TTTTTSS   SEEEESSS SSTTTTS  S EEEEEEEE HHHHHHSSBS TTSSSTTTS B SSS :    
ExpBur          :----eebbeebbeeeebebbbbbeeeebeeebbebeebeeeeebeeeeeeeeebeebeeebbeebebbbbbbbeebbebbbeeeeeeebbbbbebbeeee:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************               :
5x5b_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXXXXXXXXXX: 504
SecStr          : EEEEEE TTTT  SS   S   B   SS   TT        B SSS    TTSTT B SB      TTS GGGS EEEEEEE  ---------------:    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebebebeeeeeebbbbbbbbbbe---------------:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x5b_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SS EE   SS   EEEEEE      TT   EE SSSSEEEEE TTT  EEEEEE       EEE  TTT     EEEESS HHHHHHHHHTT  TT:    
ExpBur          :eeeeebbbebebeebeeebbbeebeeebeeeeeebeeeeeeeebbebbbeeeebebeebbebbbbbbbbebeebeeebbbbbebebeebeebeeeebbee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x5b_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    S    BTTBEESS EE SS    SEEEETTEEEE   ---------   EEEE   S        SSEEEEEEEE     EEEEE    EE :    
ExpBur          :ebeebeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbb:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x5b_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :  HHHHHSSS HHHHHHHHTT SSSSSHHHHTHHHHHHHHHHHHHHTTTSSS     S   BTTB    S  TTT SSSS HHHHHHTTS  --------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeeeeebeebbeebbebbbebbeebbeebeeebebbeeeebebbebebbbbeeeeeeebbebbebbbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :            ****************************************************************************************:
5x5b_A_1     805:XXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :------------       TT   EE  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHTS THHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :------------eeeeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbebbebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x5b_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHHS HHHHHHHHHHHHHHHHHHHHTTTTT  TTSS SSHHHHHHSSTTTTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS:    
ExpBur          :eebeeeeebeeebbebeeebeebbeebeeebeeeeebebeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x5b_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTSSSSSEEEEEEEEETTEEEEEEEE  EEEEEEEEE SSB SSSS BEESS   EEETTEE B  TTS   B   STTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeeeeeeeeeeeeeeebbbbeeeeeebbbbebbebeeeeeeebbee:

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