Protein Model on 5x5b_A_1_C_1 (TEMPLATE: 5x5b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1033 aa] Spike glycoprotein
2 b C 1 (C) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein 42Y 45E 46I 47F 48R 51T 110K 112Q 160T 189N 191D 192G 193F 217K 218P 221K 223P 224L 225G 226I 227N 269N 719D 722M 737Q 738Y 740S 741F 744Q 746N 747R 750S 766Q 768K 769Q 770M 771Y 772K 779F 780G 830D 831L 835Q 836K 837F 838N 839G 844P 845P 846L 847L 848T 851M 855Y 865T 868W 869T 871G 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 894T 895Q 896N 899Y 946K 948L 949S 957S 960N 964S 965R 966L 967D 970E 987Q 991T 994L 995I 1001R 1012S 1013E 1016L 1017G 1021R 1100D (identity: 100.0 %/94.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x5b_A_1 identity=94.8%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x5b_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     SS      EEE  TT  EE  SS    SEEEEEEEEE  SS  EEEE   SS      EE  S EEEEE  SS  EEEEEEESSSSSSSEEEEEE:    
ExpBur          :eeeebeeeeeeeeeeeebbebbbbbbeeeeeeeeeeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    
Contact         :                        b  bbbb  b                                                          b b     

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x5b_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SSEEEEEEEEE   SS    B TTT       S   EEEEEEEEEEEE     S   SS S  EEEEEEEETTEEEEEEEE     SSS      EEE:    
ExpBur          :beeebbbbbbbbbebbebbbbebeeeebeeeeebbeeeeeeeebeeebeeeebebbeeeeebeebbbbbbbeeeeebbbbebebebebeeebeeeeebbe:    
Contact         :                                          b                            b bbb                       b

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     ***********************************************************************  :
5x5b_A_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRXX: 304
SecStr          :EEEE        EEEEEE  B ----     S  EEEEE EEEEEEEEE SSSSEEEEEETTSSHHHHHHHHHT S   SEE          B     --:    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeeeeebbeeeeebbbe--:    
Contact         :b  b bbbbb                                         b                                                

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :    ************************************************************************************************:
5x5b_A_1     305:XXXXLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :----  GGGTTTT S    STT EEEEE S    TTTTTSS   SEEEESSS SSTTTTS  S EEEEEEEE HHHHHHSSBS TTSSSTTTS B SSS :    
ExpBur          :----eebbeebbeeeebebbbbbeeeebeeebbebeebeeeeebeeeeeeeeebeebeeebbeebebbbbbbbeebbebbbeeeeeeebbbbbebbeeee:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************               :
5x5b_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXXXXXXXXXX: 504
SecStr          : EEEEEE TTTT  SS   S   B   SS   TT        B SSS    TTSTT B SB      TTS GGGS EEEEEEE  ---------------:    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebebebeeeeeebbbbbbbbbbe---------------:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x5b_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SS EE   SS   EEEEEE      TT   EE SSSSEEEEE TTT  EEEEEE       EEE  TTT     EEEESS HHHHHHHHHTT  TT:    
ExpBur          :eeeeebbbebebeebeeebbbeebeeebeeeeeebeeeeeeeebbebbbeeeebebeebbebbbbbbbbebeebeeebbbbbebebeebeebeeeebbee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x5b_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    S    BTTBEESS EE SS    SEEEETTEEEE   ---------   EEEE   S        SSEEEEEEEE     EEEEE    EE :    
ExpBur          :ebeebeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbb:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x5b_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :  HHHHHSSS HHHHHHHHTT SSSSSHHHHTHHHHHHHHHHHHHHTTTSSS     S   BTTB    S  TTT SSSS HHHHHHTTS  --------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeeeeebeebbeebbebbbebbeebbeebeeebebbeeeebebbebebbbbeeeeeeebbebbebbbeebe--------:    
Contact         : b  b              bb bb  b bb  b               b bbbbb      bb                                     

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :            ****************************************************************************************:
5x5b_A_1     805:XXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :------------       TT   EE  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHTS THHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :------------eeeeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbebbebeeebbeeeeeebbeebbebbeebe:    
Contact         :            bb   bbbbb    bbbbb  b   b         b  bb bb  bbbbbb b   b       bbb  b                  

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x5b_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHHS HHHHHHHHHHHHHHHHHHHHTTTTT  TTSS SSHHHHHHSSTTTTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS:    
ExpBur          :eebeeeeebeeebbebeeebeebbeebeeebeeeeebebeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbb:    
Contact         :                            b bb       b  b   bbbb  b                b   b  bb     b          bb  bb

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x5b_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTSSSSSEEEEEEEEETTEEEEEEEE  EEEEEEEEE SSB SSSS BEESS   EEETTEE B  TTS   B   STTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeeeeeeeeeeeeeeebbbbeeeeeebbbbebbebeeeeeeebbee:    
Contact         :   b                                                                              b

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