Protein Model on 8h11_A_1_B_1
(TEMPLATE: 
8h11
)Protein Model on 8h11_A_1_B_1
(TEMPLATE: 8h11
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (B) | polymer(polypeptide(L)) [992 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (A) | polymer(polypeptide(L)) [979 aa] | Spike glycoprotein :SPIKE_SARS | 42Y 44D 45E 46I 47F 110K 112Q 129N 191D 192G 193F 217K 221K 223P 225G 226I 227N 269N 271T 719D 721N 722M 727D 737Q 738Y 739G 740S 744Q 747R 768K 769Q 770M 771Y 772K 779F 822C 826I 831L 835Q 836K 837F 839G 841T 843L 845P 846L 848T 851M 854A 855Y 865T 866A 868W 871G 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 945V 949S 957S 958V 960N 964S 965R 966L 967D(C) 984Q 987Q 994L 1001R 1012S 1013E 1021R (identity: 98.8 %/90.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h11_A_1 identity=90.6% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h11_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEETT EE SS SEEEEEEEEE TTEEEEEE ------- EE SS EEEEEEESS EEEEE SSSSTTS EEEEEEETTEEEEEEEEE:
ExpBur :eebebbebbbbbbeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbebeeeeeeebbebbbb:
Contact : b bbbb b b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:***** ************ ***************************************************:
8h11_A_1 121:ELCDNXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : ------------------- EEEEEEEEEE ------------- EEEEEEEEEETTEEEEEEEEE SS EEEEEEEE E:
ExpBur :eeeee-------------------eeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebeeebee:
Contact : bbb b b b bbb
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:****** *********************************************************************************:
8h11_A_1 221:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ------------- EEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHT S SEEEEEEEEEB EEEE HHHHS:
ExpBur :bebeee-------------ebbbbbebeebebbbebeeebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeeeebbbbeeeeeebebeebbe:
Contact : b b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** *********************************************************** :
8h11_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDX: 420
SecStr : S BSSS EEEEE SEE HHHHS TT SEEEEESS STTTTT BS EEEEEEEE STTTTSSSTT SHHHHHT TT EEEEEEE TTT -:
ExpBur :eeebebbebbeeeebeebebebbebeeeeebeeeebeeeebeebbeebbbbbebbbbbbebebeebbbbeeeeebbbebbebbeebebbbbbbebeeee-:
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
: ****************** ******* *****************************************:
8h11_A_1 421:XXXXXXXYKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXPLNDYGFXXXXXXGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :------- EEE SS TT --------------------- EEE ------ EEEEEEEE SSSS EE S SSEEEEEET:
ExpBur :-------eebbeeeeeebeeeeebe---------------------eeeebee------eeebbbbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbb:
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h11_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TTS EEEEE TTT EEEEE EEEEEEEES TTT S EEEEET HHHHHHHHHTT BSS SS S EEE:
ExpBur :eeeeebebeeeeeebeeeebebeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebebebeeeebeeeeee:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h11_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE SS SEEEETTEEEEEE -------- EEEEEE S SSEEEEEEEEEEEEEEEEEE EEEE HHHHHTTT SH:
ExpBur :bebbbbbebeeeeeeeeeebebeeebbbbbee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbebebeebbbeebee:
Contact : b bb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:******************************************************************************** **************:
8h11_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLGDINARD: 820
SecStr :HHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE GGGS SSSSSSS HHHHHHHHHS ------ BTTTTB:
ExpBur :beebbeeeeebbeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbeeeeeeeeebebbbbbbeebee------eeebeeeeeeeeee:
Contact : bbbb b b bbbbb b b b
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h11_A_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr : TT EEEE SS HHHHHHHHHHHHHHHHHHTTGGGSSS HHHHHHHHHHHTT HHHHHTSHHHHHHHHHHHHHHHHHHTTS TTHHH:
ExpBur :eeeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:
Contact :b bbb b b b bb b b bb bb b bb bbbbbb b b bb bb
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h11_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebbebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b b bb b bbbb b b b b bb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h11_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS EE BSTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeebeeeeeeeeeebeeee:
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