Protein Model on 8h0z_A_1_B_1
(TEMPLATE: 
8h0z
)Protein Model on 8h0z_A_1_B_1
(TEMPLATE: 8h0z
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (B) | polymer(polypeptide(L)) [1045 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (A) | polymer(polypeptide(L)) [1022 aa] | Spike glycoprotein :SPIKE_SARS | 45E 46I 47F 48R 110K 112Q 191D 192G 193F 217K 223P 225G 226I 227N 352Y 353S 356Y 357N 360F 361F 364F 371A 372T 375N 414D 415D 489I 719D 722M 727D 733N 736L 737Q 738Y 740S 741F 744Q 747R 769Q 770M 771Y 772K 779F 815F 816M 817K 818Q 819Y 823L 826I 829R 836K 837F 843L 845P 846L 847L 848T 851M 855Y 865T 866A 868W 872A 874A 875A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 945V 948L 949S 957S 958V 960N 961D 963L 964S 965R 966L 967D(C) 976D 987Q 994L 995I 1001R 1012S 1013E 1021R (identity: 99.0 %/95.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h0z_A_1 identity=95.4% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h0z_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEE SS EE S S EEEEEEEE TT EEEEE ------- EE SSEEEEEEEESS EEEEEEESSSSTTS EEEEEE SS EEEEEEE :
ExpBur :eebebbebbbbeeeeeeebebeeebeeebbbbebebebee-------eeebebeebbbbbbbbeeeebbbbbbbbebeeeeebbbbbeeeebebbebbbb:
Contact : bbbb b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:******** ******************* ***************************************************:
8h0z_A_1 121:ELCDNPFFXXXXXXXXXXXTMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : SS ----------- SS S EEEEEEEE ----------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEEE E:
ExpBur :ebeeebee-----------eebeeeeeeeeeeeebeee-----------bebebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebebebee:
Contact : bbb b b bbb
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h0z_A_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ----------- EEEEEE EEEEEEEEE SSS EEEEEESSSSHHHHHHHHHTSS SEEEE EEEE SB HHHHHS:
ExpBur :bbbbbee-----------ebbbbbbebeebbbbbebeeeeebeebbbbebebbbbbbbeeeebebeebeeebeeebeeeeeebbbbeeeeeebebeebbe:
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h0z_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGGTTT SEEEEESS TGGGGG BS EEEEEEEEEGGGGGGSSTT SHHHHHT SS EEEEEEE TTTS :
ExpBur :eeebbbbbebeeeebeebbeeeeebeeeeeeeeeeeeeeeeeebeeebbbebebbbbbbbbebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : bb bb bb b bb b bb
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h0z_A_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :BSS B EEE SS TT B SS SSSSS B SEEE BBSSS GGGSEEEEEEEE SSS EE S SS EEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbeeeeeebebbbeeeeeeeeeeebbebbbb:
Contact : b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h0z_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TTS EEEEE TTT EEEEE S SEEEEEES TTT S EEEEET GGG HHHHTGGGS HHHHTTTS S EEE:
ExpBur :eeeeebbbeeeeeebeeeebbbeeeeeebebbbbeeeeebbebeebeeeebbbbbbbbeebeebbbbbeeeebeebeeebebeebeebbeebbeeeeeee:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h0z_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE S SEEEETTEEEEEE -------- EEEEEE S TTEEEEE EEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbbee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:****************************************************************************************************:
8h0z_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 820
SecStr :HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTSS SSSS SS HHHHHHHHHS S HHHHHS SS :
ExpBur :bbeebeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeeebebbbbbbeebeeeeeeeeeeeeebeeeeeeee:
Contact : b bbb bb b b bbbb b bbbbb b b b
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h0z_A_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHTTTTTTTSS HHHHHHHHHHHHT HHHHHHTHHHHHHHHHHHHHHHHHHTTT SGGGHHH:
ExpBur :eebebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbeebbeebeeebeeeeeebeeb:
Contact : bb b bbbb b b bb b b bbbbbbb b b bb bb
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h0z_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHHHSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :bebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b bb bb bb bbbbb b b bb b bb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h0z_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEE EEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS B BSTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbebbbeeeebbeeebeeeeebeeeeeeeeeebeeee:
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[assembly_id:1]
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