Protein Model on 6ack_A_1_B_1
(TEMPLATE: 
6ack
)Protein Model on 6ack_A_1_B_1
(TEMPLATE: 6ack
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 45E 46I 47F 48R 112Q 129N 158N 189N 191D 192G 193F 218P 223P 225G 226I 227N 269N 399P 400G 414D 719D 721N 722M 737Q 738Y 739G 741F 744Q 747R 768K 769Q 770M 771Y 772K 774P 776L 832I 833C 834A 835Q 836K 837F 838N 844P 845P 846L 847L 848T 851M 855Y 865T 866A 868W 869T 870F 872A 875A 876L 877Q 878I 879P 882M 886Y 889N 894T 895Q 896N 899Y 900E 945V 949S 960N 963L 964S 965R 966L 967D 970E 984Q 987Q 994L 1009T 1013E 1021R (identity: 100.0 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ack_A_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6ack_A_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S EEEEE S B SSSS S EEEEEEEE TTEEEEEB SS EEE SS EEEEEEESS S EEEESSSSTTEEEEEEE:
ExpBur :eeeebeeeeeeeeeebebbebbbbeebeeeeeeebeeeebebbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:
Contact : bbbb b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6ack_A_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSEEEEEEEEE S EEE SSS TT TT SSEEEEEEEEE S SSB EEEEEEEEEETTEEEEEE B SSS S BE:
ExpBur :beeebbbbebbbbebbebbbbbbeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebeeeeebbe:
Contact : b b b bbb
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6ack_A_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEEEE EEEE EEE ---- S EEEEE EEEEEEEEE TTS EEEEEESSS HHHHHHHHHT SS SS EE S EE EE :
ExpBur :eeeebebeeebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebbeeeebeebbbbebebbbebebeeeebebeebeeebeebebeeebebbbbe:
Contact :b b bbb b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
6ack_A_1 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr :S B THHHHTS S STT EEEEE S B S TTTS S EEESSS SGGGGGS BS EEEEEEEE SSTTTT SSS SHHHHTS SSS :
ExpBur :eeeeebebeebbeeeebebbbebbebebeebebebeebeeeeebeeeeeeeeeeeebeeebbbbbbbbbbbbbbebbeebeeeeeeebbbebbbbeeeeb:
Contact : bb b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
6ack_A_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr : EEEEEE TTTT TT TT EEE SS SS TTS TTSTT EEE TT TTTS EEEEEEE TT SS BB S :
ExpBur :bbbbbbebeeebbeeebbeebebbeeeeeebeeebeeeeeeebbeeeeeeeeeeeebeebbeebbbeeebeeeebbbbbbbbbbeeeeeebbbbbeeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6ack_A_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : TTS EEEE SS EEEEEEEE TT SB TTTT EEEETTTEEEEEE EE EEB SSS BB S SSHHHHHHHTT SS:
ExpBur :eeeeeebbebbbbebeeebebeebeeebeeeebeeeeeeeeeebbebeeeeebebeeebbebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6ack_A_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS EE STT EEBT EE S SEE SSS EEE ------------- EEE S SS B EE EEEEEEE EE:
ExpBur :ebeeeeeebebeeeeebbbbbbeeeeeeeeeebebeeebbbbe-------------bbbbeeeeeeeeeeeeeeeeeebebebebebeebbbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6ack_A_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr :E TTTSS S SHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHH S STT TTTSB TTSSS BHHHHHHHHHS ------:
ExpBur :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeeeeeeeeeeeeeebebbebeebbbeeeeeeeebebbbbbeeebeee------:
Contact : b bb bbb b b b bbbbb b b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6ack_A_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- SSSEEE SS HHHHHHHHHHHHHHHHSS S SSSS SHHHHHHHHHTTT SHHHHTTHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeebeeeebbebbbebbeebebeeebbeeebeebbeebbebbeebe:
Contact : bbbbbbb bbbbb b b bb bbb b bbbbb b b b bbb bb
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6ack_A_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTHHHHHHHHHHHHHHHHHHHHHH SSSS SSTTTHHHH STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:
ExpBur :eebeeeeeebeebeebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbeb:
Contact : b b b bbbbb b b b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6ack_A_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : SSSSSSSS SEEE EETTEEEEEEE EE B SSEESSS EE SSSS EE SSS EE SSS B SSSS SSS S S :
ExpBur :bbeeeebbbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebeeeeeebeeeebeeeeeeeeeebebee:
Contact : b
queryA 1118:TV:1119
:**:
6ack_A_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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