Protein Model on 5x5b_A_1_B_1 (TEMPLATE: 5x5b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1033 aa] Spike glycoprotein
2 b B 1 (B) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein 303S 304N 535T 544R 545F 546Q 548F 549Q 551F 552G 553R 555V 556S 557D 558F 559T 561S 573I 575P 577S 578F 600D 601V 602N 632Q 633A 651P 652I 653G 654A 655G 656I 657C 678T 679M 681L 683A 684D 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 939Q 943T 947Q 950S 951N 952F 953G 977R 984Q 988T 991T 992Q 995I 999E 1021R 1022V 1023D 1027K 1028G 1029Y 1051P 1056N 1061P 1071F 1072P 1073R 1074E 1076V 1089R 1103F 1104V (identity: 100.0 %/94.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x5b_A_1 identity=94.8%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x5b_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     SS      EEE  TT  EE  SS    SEEEEEEEEE  SS  EEEE   SS      EE  S EEEEE  SS  EEEEEEESSSSSSSEEEEEE:    
ExpBur          :eeeebeeeeeeeeeeeebbebbbbbbeeeeeeeeeeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x5b_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SSEEEEEEEEE   SS    B TTT       S   EEEEEEEEEEEE     S   SS S  EEEEEEEETTEEEEEEEE     SSS      EEE:    
ExpBur          :beeebbbbbbbbbebbebbbbebeeeebeeeeebbeeeeeeeebeeebeeeebebbeeeeebeebbbbbbbeeeeebbbbebebebebeeebeeeeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     ***********************************************************************  :
5x5b_A_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRXX: 304
SecStr          :EEEE        EEEEEE  B ----     S  EEEEE EEEEEEEEE SSSSEEEEEETTSSHHHHHHHHHT S   SEE          B     --:    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeeeeebbeeeeebbbe--:    
Contact         :                                                                                     bb             

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :    ************************************************************************************************:
5x5b_A_1     305:XXXXLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :----  GGGTTTT S    STT EEEEE S    TTTTTSS   SEEEESSS SSTTTTS  S EEEEEEEE HHHHHHSSBS TTSSSTTTS B SSS :    
ExpBur          :----eebbeebbeeeebebbbbbeeeebeeebbebeebeeeeebeeeeeeeeebeebeeebbeebebbbbbbbeebbebbbeeeeeeebbbbbebbeeee:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************               :
5x5b_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXXXXXXXXXX: 504
SecStr          : EEEEEE TTTT  SS   S   B   SS   TT        B SSS    TTSTT B SB      TTS GGGS EEEEEEE  ---------------:    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebebebeeeeeebbbbbbbbbbe---------------:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x5b_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SS EE   SS   EEEEEE      TT   EE SSSSEEEEE TTT  EEEEEE       EEE  TTT     EEEESS HHHHHHHHHTT  TT:    
ExpBur          :eeeeebbbebebeebeeebbbeebeeebeeeeeebeeeeeeeebbebbbeeeebebeebbebbbbbbbbebeebeeebbbbbebebeebeebeeeebbee:    
Contact         :                 b        bbb bb bbb bbbbb b           b b bb                     bbb               

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x5b_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    S    BTTBEESS EE SS    SEEEETTEEEE   ---------   EEEE   S        SSEEEEEEEE     EEEEE    EE :    
ExpBur          :ebeebeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbb:    
Contact         :              bb                 bbbbbbb                    bb b bbbbbbbbb bbb                      

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x5b_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :  HHHHHSSS HHHHHHHHTT SSSSSHHHHTHHHHHHHHHHHHHHTTTSSS     S   BTTB    S  TTT SSSS HHHHHHTTS  --------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeeeeebeebbeebbebbbebbeebbeebeeebebbeeeebebbebebbbbeeeeeeebbebbebbbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :            ****************************************************************************************:
5x5b_A_1     805:XXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :------------       TT   EE  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHTS THHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :------------eeeeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbebbebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x5b_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHHS HHHHHHHHHHHHHHHHHHHHTTTTT  TTSS SSHHHHHHSSTTTTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS:    
ExpBur          :eebeeeeebeeebbebeeebeebbeebeeebeeeeebebeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbb:    
Contact         :                     b   b   b  bbbb                       b      b   b  bb  b   b                  

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x5b_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTSSSSSEEEEEEEEETTEEEEEEEE  EEEEEEEEE SSB SSSS BEESS   EEETTEE B  TTS   B   STTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeeeeeeeeeeeeeeebbbbeeeeeebbbbebbebeeeeeeebbee:    
Contact         :   bbb   bbb                     b    b    b         bbbb b            b             bb

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