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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | PD 1 (D5) | polymer(polypeptide(L)) [468 aa] | PF16 :A0A2K3DEG1_CHLRE | |
2 | b | JD 1 (C4) | polymer(polypeptide(L)) [281 aa] | CPC1 :Q6J4H1_CHLRE | 88S(N) 89N(E) 90V(I) 93Q (identity: 25.0 %/25.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7sqc_PD_1 identity=25.2% |
queryA 75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162 :* * ** ** ** * * * * * * *** * ** * *** *: 7sqc_PD_1 70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167 SecStr :TS -HHHHHHHHHHTHHHHHHHHTTT HHHHHHHHHHHHHHHTT HHHHHHHHHHTHHHHHHHHHHSS -HHHHHHHHHHHHHHTTS HHHHHHHHHTT: ExpBur :eee-eebbeebbeeebbeebbebbeebeeebbebbbbbbbbbbebbeebbebbeeeebbebbbebbeeee-eebbbbbbebbbebbeeeeebbeebeebe: Contact : bbb b queryA 163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262 :* * * * ** * * *** * * * * ** * * * : 7sqc_PD_1 168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262 SecStr :THHHHHHHHHSS HHHHHHHHHHHHHHHTT HHHHHHHHHHT HHHHGGGGTS HH-----HHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHTS: ExpBur :bbeebbebbeeeeeebbbbbbbbbbebbeeeeebbeebbeeebbeebeebbeeeeee-----bbebbbbbbbebbebeeebbeebeeeebbeebbebbeb: queryA 263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361 : * * * ** * * ** * * * * * ** ** * * * ** : 7sqc_PD_1 263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362 SecStr :S HHHHHHHHHHHHHHHTT HHHHHHHHHHT HHHHHHHHHT TTTHHHHHHHHHHHHHS HHHHHHHHTTT HHHHHHHHHT HHHHHHHHHHHHH: ExpBur :eeeebbbbbbbbbbbbbeeeeebbeebeeeebbeebbebbeeeeeebbebbbbbbbebbeeeeebbeebbeeebbebbbebbeeeeeeebbbbbbebbbb: queryA 362:ITAGRQDQIQQVVNHGLVPFLVSV----LSKADFKTQ: 394 :* * * * *** * * ** : 7sqc_PD_1 363:IGRXXPDHAKAVADTGCLATLVSLEXXXASSDDLKTK: 399 SecStr :HH -- HHHHHHHHHTHHHHHHHH --- HHHHHHHH: ExpBur :bbe--eebbeebbeeebeeebeeee---eebeeebee: |