CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | D 1 (B) | polymer(polypeptide(L)) [422 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [5 aa] | LARGE T ANTIGEN | 240K 321V 322T 323G 328T 357W 360S 361N 364A 396E 399W 403N (identity: 100.0 %/49.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1bk6_D_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *: 1bk6_D_1 4:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 103 SecStr :HHHHHT S HHHHHHHHHHHHHTTS SS HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHHHHS HHHHH: ExpBur :bbeebeeeeeebbeebbebbbeebeeeeeeebeebbeeebbebbbebbeeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbeebeeebeb: queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *: 1bk6_D_1 104:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 198 SecStr :HHHHHHHHHHHH HHHHHHHHHTT HHHHHHHT-----TS HHHHHHHHHHHHHHH SSS HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHHS: ExpBur :bbbebbbbbbeeeeebbeebbeeebbebbeebb-----eeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeeeeebbbbbbebbbbbbe: Contact : b queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380 :** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *: 1bk6_D_1 199:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 298 SecStr :S HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HH: ExpBur :eeeebbeebbeeebbeebbebbebeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebeebbbebbbebbeeeeebbeebbebebbe: Contact : bbb b b bb b queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473 : ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **: 1bk6_D_1 299:PLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENIIKMGEADKEARGLNINENADFIEKAGGMEKI: 398 SecStr :HHHHHHHHS HHHHHHHHHHHHHHHHTTTT HHHHHHHHHTT HHHHHHHTTT HHHHHHHHHHHHHHHHHHHHHHHHTT SS HHHHHHHHTTHHHHH: ExpBur :ebbebbeebeeebbebbbebbbbbbebbeeeeebbeebbeeebbebbbebbeebeeebbebbbebbbebbebbeeebeeeeeeebebbeebbebebeebb: Contact : b b b queryA 474:EALQNHENESVYKASLSLIEKYF: 496 : * ** * ** **: 1bk6_D_1 399:FNCQQNENDKIYEKAYKIIETYF: 421 SecStr :HHGGG S HHHHHHHHHHHHHH : ExpBur :eebbebeeeebeebbebbbeebb: |