Protein Model on 5mfe assembly_id=4
(TEMPLATE: 
5mfe
assembly_id:4
)Protein Model on 5mfe assembly_id=4
(TEMPLATE: 5mfe
assembly_id:4
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [281 aa] | YIIIM5AII | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [7 aa] | (RR)4 | 142W(R) 145T(S) 146N(Q) 149S 150G 152S(N) 155T(I) 181Q(E) 184W 188N 191G(S) 192D(G) 193G 194S(N) 197R(I) 227R(Q) 231W 234S 235N 238R(S) 270D(E) 273W 277Y(N) 315R(W) (identity: 37.5 %/39.9 %) | |
| 3 | c | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 262H(S) 263D(P) (identity: 0.0 %/39.9 %) | |
| 4 | d | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 195V(E) (identity: 0.0 %/39.9 %) | |
| 5 | e | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 176A(E) 215V(S) (identity: 0.0 %/39.9 %) | |
| 6 | f | I 1 (A) | non-polymer(CA) | CALCIUM ION | 174P 176A(E) (identity: 50.0 %/39.9 %) | |
| 7 | g | J 1 (A) | non-polymer(CA) | CALCIUM ION | 396E 399W(E) (identity: 50.0 %/39.9 %) | |
| 8 | h | K 1 (A) | non-polymer(CA) | CALCIUM ION | 263D(P) 264D(N) 265P(E) (identity: 0.0 %/39.9 %) | |
| 9 | i | L 1 (A) | non-polymer(CA) | CALCIUM ION | 305S(P) 307L(E) (identity: 0.0 %/39.9 %) | |
| 10 | j | M 1 (A) | non-polymer(CA) | CALCIUM ION | 347P 349T(E) (identity: 50.0 %/39.9 %) | |
| 11 | k | N 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 347P 348K(N) 349T(E) (identity: 33.3 %/39.9 %) | |
| 12 | l | O 1 (A) | non-polymer(CA) | CALCIUM ION | 216P 218M(E) (identity: 50.0 %/39.9 %) | |
| 13 | m | P 1 (A) | non-polymer(CA) | CALCIUM ION | 131T(P) 133C(Q) (identity: 0.0 %/39.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5mfe_A_1 identity=39.9% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
: * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * :
5mfe_A_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr :HHHHHHGGG S HHHHH-HHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HH-:
ExpBur :beebbeebebeeeeebb-ebbeebbebbeeeeeebeebbeeebbebbbebbeeeeeebbeebbebbbbbbebeeebbebbbeeebbebbbebbeeeeee-:
Contact : m m b bb bb b b f e b b b bbbbd b el l
Contact : f
queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
: * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * :
5mfe_A_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHH:
ExpBur :----bbbbbbebbbbbbebeeebbbebbeee--bbeebbebbeeeeeebbeebbebbbbbbebeeebbebbbeeebbeebbebbeeeeeebbebbbebbb:
Contact : b b bb bb cchh b b b i i b
Contact : h
queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTS: 406
:** * ** * ******* ** * * ** * *** * * * * * * * * **** * *:
5mfe_A_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS: 285
SecStr :HHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHH :
ExpBur :ebbeeeeebbbebbeeebbeebbebbebeeeebbbbbbebbbebbebbeebbebbeeeebeebbeebeeeeeeebeebbeebbeebee:
Contact : jkj g g
Contact : k k
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