Protein Model on 5mfh assembly_id=1
(TEMPLATE: 
5mfh
assembly_id:1
)Protein Model on 5mfh assembly_id=1
(TEMPLATE: 5mfh
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [283 aa] | YIIIM5AII | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [8 aa] | (RR)5 | 146N(Q) 152S(N) 155T(I) 184W 188N 190A 191G(S) 192D(G) 193G 194S(N) 197R(I) 227R(Q) 231W 234S 235N 238R(S) 239N 242P(I) 270D(E) 273W 277Y(N) 280D(S) 281G (identity: 43.5 %/39.9 %) | |
| 3 | c | G 1 (A) | non-polymer(CA) | CALCIUM ION | 347P 349T(E) (identity: 50.0 %/39.9 %) | |
| 4 | d | H 1 (A) | non-polymer(CA) | CALCIUM ION | 174P 176A(E) (identity: 50.0 %/39.9 %) | |
| 5 | e | I 1 (A) | non-polymer(CA) | CALCIUM ION | 396E 399W(E) (identity: 50.0 %/39.9 %) | |
| 6 | f | J 1 (A) | non-polymer(CA) | CALCIUM ION | 126S(Q) 129G(N) (identity: 0.0 %/39.9 %) | |
| 7 | g | K 1 (A) | non-polymer(CA) | CALCIUM ION | 305S(P) 307L(E) (identity: 0.0 %/39.9 %) | |
| 8 | h | L 1 (A) | non-polymer(CA) | CALCIUM ION | 263D(P) 265P(E) (identity: 0.0 %/39.9 %) | |
| 9 | i | M 1 (A) | non-polymer(CA) | CALCIUM ION | 216P 218M(E) (identity: 50.0 %/39.9 %) | |
| 10 | j | N 1 (A) | non-polymer(CA) | CALCIUM ION | 131T(P) 133C(Q) (identity: 0.0 %/39.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5mfh_A_1 identity=39.9% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
: * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * :
5mfh_A_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr :HHHHHHGGG S HHHHH-HHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HH-:
ExpBur :eeebbeebebeeeeebb-ebbeebbebbeeeeeebeebbebebbebbbebbebeeeebbeebbebbbbbbebeeebbeebbeeebbeebbebbeeeeee-:
Contact : f f j j b b b d d b b bbbbb b i i
queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
: * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * :
5mfh_A_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHH:
ExpBur :----bbbbbbebbbebbebeeebbbebbeee--bbebbbebbeeeeeebbebbbebbbbbbebeeebbebbbeeebbeebbebbeeeeeebbebbbebbb:
Contact : b b bb bbbb b h h b b b bb g g
queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTS: 406
:** * ** * ******* ** * * ** * *** * * * * * * * * **** * *:
5mfh_A_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS: 285
SecStr :HHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHH :
ExpBur :bbbeeeeebbbebbeeebbebbbebbeeeeeebbbbbbebbbebbebeeebbebbeeeebeeebeebeebeeeebeebbeebbeebee:
Contact : c c e e
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