Protein Model on 5mff assembly_id=1
(TEMPLATE: 
5mff
assembly_id:1
)Protein Model on 5mff assembly_id=1
(TEMPLATE: 5mff
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [280 aa] | YIIIM5AII | 149S 150G 151T(G) 152S(N) 194S(N) 239N 280D(S) 282P(G) 283N 308P(Q) 322T(S) 324T(G) 325D(N) 348K(N) 349T(E) 350N(Q) 361N 364A(S) 365G 390D(N) 391F(E) 392K 395K (identity: 34.8 %/40.5 %) | |
| 2 | b | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [280 aa] | YIIIM5AII | |
| 3 | c | E 1 (E) | polymer(polypeptide(L)) [10 aa] | (RR)5 | 180E(Q) 181Q(E) 184W 228N(E) 231W 270D(E) 273W 312P(E) 315R(W) 353K(Q) 354E 357W 396E (identity: 46.2 %/40.5 %) | |
| 4 | d | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 5 | e | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 6 | f | I 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 239N 280D(S) 281G 282P(G) (identity: 50.0 %/40.5 %) | |
| 7 | g | J 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 305S(P) 306E(N) 307L(E) 308P(Q) (identity: 0.0 %/40.5 %) | |
| 8 | h | K 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 293G 295V(L) 296P (identity: 66.7 %/40.5 %) | |
| 9 | i | S 1 (E) | non-polymer(EDO) | 1,2-ETHANEDIOL | 311T(Q) (identity: 0.0 %/40.5 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:5mff_B_1 identity=40.5% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
: * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * :
5mff_B_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr :HHHHHHGGG S HHHHH-HHHHHHHHHHTS HHHHHHHHHTT HHHHHHHTT HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HH-:
ExpBur :beebbeebebeeeeebb-ebbeebbebbeeeeeebeebbeeebbebbbebbebeeeebbebbbebbbbbbebbeebbebbbeeebbebbbebbebeeee-:
Contact : aaaa cc c a
queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
: * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * :
5mff_B_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHH:
ExpBur :----bbbbbbebbbbbbebeeebbebbbeee--bbebbbebbebeeeebbbbbbebbbbbbebeeebbebbbeeebbebbbebbebebeebbebbbebbb:
Contact : c c a a c c afaa h hh ggga ic c
Contact : f f f g
queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397
:** * ** * ******* ** * * ** * *** * * * * * * * * ****:
5mff_B_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276
SecStr :HHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHH:
ExpBur :bbbeeeeebbbebbeeebbeebbebbebebeebbebbbebbbbbbebeeebbebbeeebbeeebeebeebeeeebeeeb:
Contact : a aa aaa cc c a aa aaa ac
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