Protein Model on 4pls assembly_id=1
(TEMPLATE: 
4pls
assembly_id:1
)Protein Model on 4pls assembly_id=1
(TEMPLATE: 4pls
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [280 aa] | Arm00010 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [281 aa] | Arm00010 | 241N 283N 286I 287G(Q) 290V(I) 295V(L) 299V 302L 307L(E) 311T(Q) 314L 315R(W) 318G 319N 320I 321V(A) 322T(S) 324T(G) 325D(N) 327Q 328T(K) 330V(A) 331V 334A 335G 339V(A) 340F(L) 343L 350N(K) 351I 354E 358T(A) 361N(K) 362I (identity: 50.0 %/39.5 %) | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [280 aa] | Arm00010 | 131T(P) 132D(N) 133C(E) 134S(Q) 137Q 174P 175H(N) 176A(E) 177H(Q) 180E(Q) 216P 217D(N) 218M(E) 219S(Q) 227R(Q) 263D(P) 264D(N) 265P(E) 266E(Q) 269A(Q) 306E(N) (identity: 14.3 %/39.5 %) | |
| 4 | d | D 1 (D) | polymer(polypeptide(L)) [280 aa] | Arm00010 | 305S(P) 306E(N) 307L(E) 308P(Q) 311T(Q) 333D(E) (identity: 0.0 %/39.5 %) | |
| 5 | e | E 1 (A) | non-polymer(CA) | CALCIUM ION | 263D(P) 265P(E) (identity: 0.0 %/39.5 %) | |
| 6 | f | F 1 (A) | non-polymer(CA) | CALCIUM ION | 305S(P) 307L(E) (identity: 0.0 %/39.5 %) | |
| 7 | g | G 1 (A) | non-polymer(CA) | CALCIUM ION | 216P 218M(E) (identity: 50.0 %/39.5 %) | |
| 8 | h | H 1 (A) | non-polymer(CA) | CALCIUM ION | 131T(P) 133C(E) (identity: 0.0 %/39.5 %) | |
| 9 | i | I 1 (A) | non-polymer(CA) | CALCIUM ION | 174P 176A(E) (identity: 50.0 %/39.5 %) | |
| 10 | j | J 1 (B) | non-polymer(CA) | CALCIUM ION | ||
| 11 | k | K 1 (B) | non-polymer(CA) | CALCIUM ION | ||
| 12 | l | L 1 (B) | non-polymer(CA) | CALCIUM ION | ||
| 13 | m | M 1 (B) | non-polymer(CA) | CALCIUM ION | ||
| 14 | n | N 1 (B) | non-polymer(ACT) | ACETATE ION | ||
| 15 | o | O 1 (B) | non-polymer(CA) | CALCIUM ION | ||
| 16 | p | P 1 (C) | non-polymer(ACT) | ACETATE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4pls_A_1 identity=39.5% |
queryA 112:IDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLA: 211
:* * ** * * * * * * * ***** ** ** * ** ** ** ** * * * ***** * ** ** * :
4pls_A_1 36:IQAVIDAGALPALVQLLSSPNEQILQ-EALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQ: 134
SecStr :HHHHHHHTHHHHHHHGGG S HHHHH-HHHHHHHHHTTS HHHHHHHHHHTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHH:
ExpBur :beebbeeebbebbbebbebeeeebbb-ebbebbbbbbeeeeebbebbbeeebbeebbebbebeeeebbeebbebbbbbbebeeebbbbbbeeebbebbbe:
Contact : cccc c cccc c
Contact : h h i i
queryA 212:LLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAV--EQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPI: 309
:** * * *** * * * ** ** ** ** * * * ** * * * * ** ** *:
4pls_A_1 135:LLSSPNEQ-----ILQEALWTLGNIASGGNEQ--IQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQI: 227
SecStr :GGG S HH-----HHHHHHHHHHHHTTS HHH--HHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHH:
ExpBur :bbeeeeee-----bbebbbebbbbbbebeeeb--bbbbbeeebbeebbebbeeeeeebbebbbebbbbbbebbeebbebbeeeebeebbeebeeeeeeeb:
Contact : cccc c b cccc c b bb b b b b dcbd
Contact : g g e e fdd
Contact : f
queryA 310:VTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNI: 362
: ** *** * ** * * *** * * ***** *:
4pls_A_1 228:LQEALWTLGNIASGGNEQKQAVKEAGAEPALEQLQSSPNEKIQKEAQEALEKI: 280
SecStr :HHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHT:
ExpBur :eebbeebbebbeebeeeeeeeeeeeeeeeebeeeeebeeeeeeeebeeeeeeb:
Contact : b bb bbbbb bb bb bb dbb bb b bb b b bb
Contact : d
|
[help]