CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RA_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [301 aa] | INTERLEUKIN-6 RECEPTOR BETA CHAIN :IL6RB_HUMAN | |
2 | b | B 2 (B) | polymer(polypeptide(L)) [167 aa] | VIRAL IL-6 :Q98823_HHV8 | 148L(W) 150V(T) 185S 186S(T) 187F(V) 188Y 189I(F) 190V 242H(S) 247S 248F(V) (identity: 36.4 %/28.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1i1r_A_2 identity=28.2% |
queryA 106:VHLLVDVPPEEPQ-LSCFRKSPLSNVVCEW-GPRST---PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCV----AS: 196 : *** * *** *** * * * * * ** * ** * * * * : 1i1r_A_2 96:ITIISGLPPEKPKNLSCIVNEG-KKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDY----STVYFVNIEVWVEAEN: 180 SecStr :EEEEEE EEEEEEEETT-S EEEEE S SS EEEEEEEETTEE EE ---------- SS TTEEE SS---- TTS EEEEEEEEE: ExpBur :bebebbbebeebeebebbbbbe-eebebebeeeeebebeeebbbbbeeeeeebeebeb----------eeeeeebbebeb----ebebeeebebbbebeb: Contact : b b bbbbbb queryA 197:SVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLR: 293 : * * * * ** * * * ** * * * ** * * * * *: 1i1r_A_2 181:ALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIR: 278 SecStr :TTEEEE EEE GGGGEE EEEEEE SSSSS EEEEEE GG--GGTS EEEEEEEEETT SS EE GGGG S SEEEE S TT EEEEEEE: ExpBur :eeeeeebeeeebbbbeebbbeebeebebeeeeeebebbebebebbeb--eeebebbbbbbebeeeeeeeeebeeeebeeeeeebebeebeeeeebbbebe: Contact : b bb queryA 294:AQEEFGQGEWSEWSPEAMGTPWTE: 317 : * * * ** ** ** * : 1i1r_A_2 279:CMKEDGKGYWSDWSEEASGITYED: 302 SecStr :EEETTS S EEEE : ExpBur :bbbeeeeeeebeebeebebebeee: |