[pdbjlvh2]Protein Model on 6acd_B_1 focusing on 846-th site

Protein Model on 6acd_B_1 focusing on 846-th site (TEMPLATE: 6acd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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FOCUSED SITES		template(6acd_B auth_asym_id:B)
SiteNum	AA	label_ seq_id	auth_ seq_id	AA	Sec	Exp/Bur	RelAcc
846	L	846	846	L	S	e	68.0

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(SPIKE_SARS)	B 1 (B)	polymer(polypeptide(L)) [1065 aa]	Spike glycoprotein :SPIKE_CVHSA

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6acd_B_1 identity=96.6%

queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6acd_B_1      18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr          :     S     S EEEE TT      SS    S EEEEEEEE  TT EEEEE   TT      EE  S EEEEEEESS TT  EEEESSSSTTSEEEEEE:    
ExpBur          :eebeeeeeeeeeeeebebeebbbbebeeeeeeeeeeebebbbbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6acd_B_1     118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr          :E SS EEEEEEE    S    EE TTT  BTT    S  EEEEEEEE        S   SSB EEEEEEEEEETTEEEEEEE   B  SSS  S     E:    
ExpBur          :beeebbbbbbbbbebbebebbebeeeebeeeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebbeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************    **************************************************************************:
6acd_B_1     218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr          :EEEEE       EEEE   EE ----     S EEEEEE EEEEEEEEE SSS EEEEEESSS HHHHHHHHHT SS  SS EEEEEEEB          :    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebbeeeebeebbbbbbebbbebebeeeeeebeebeeebeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
6acd_B_1     318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr          :    B THHHHHS S    STT EEEEE S B  SSTTTS S  SEEEESSS STTGGGS BSSEEEEEEEE SSTTTT SSS  TTHHHHT    SS  :    
ExpBur          :eeeeebebeebbeeeebbbbeebeeeebeebebebeebeeeeebeeeebeeeeeeebeeebbbbbebbbbbbebebeebbeeeeeeebbbebbebeeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
6acd_B_1     418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr          : EEEEEE TTTT  TT BTT  EE   SS   SS          TTS    TTSTT   SEE   B SSS GGGS EEEEEEE  TTSSS  BB S    :    
ExpBur          :bbbbbbebeeeebeeeebeebebbebeeeebeeebeeeeeeebbeeeeeeebeeeebeebeeebebeeeeeeeebbbbbbbbbbeebeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
6acd_B_1     518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr          :   BTS EEEE SS EEEEEEEE      SS      SSS   EEEETTTEEEEEE   SEEEEEEE   SSS    EEE SS  SSHHHHHHTTT BSS:    
ExpBur          :eeeeeebbebbbbeeeeebbbeeeeeebeeeebeeeeeeeeeebbebeeeeebebeeebbebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*******************************************             ********************************************:
6acd_B_1     618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr          :  SS   S EE  SSS  EES B  SS  S  EE SSS EE  ------------- BEE    S        SS B    SEE  EEEEEEE     EE:    
ExpBur          :ebeeeeeeeebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------ebbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :**********************************************************************************************      :
6acd_B_1     718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr          :E TTTSSS SSSSHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTT SS     S   SSS   TTTS  SSSS SS HHHHHHHHHS   ------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbebbeeebeee------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :              **************************************************************************************:
6acd_B_1     818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr          :--------------     TTSEEE   SS HHHHHHHHHHHHHHHHSS S  SSSS     SHHHHHHTTTTTT  THHHHTSHHHHHHHHHHHHHHHH:    
ExpBur          :--------------eeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
6acd_B_1     918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr          :HHHHS  STTHHHHHHHHHHHHHHHHHHHHHHS SSSS SSTTTTTTT  SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:    
ExpBur          :eebeeeeeebeebeebbeebbebeeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbeb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6acd_B_1    1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr          :    TTTS SS   EEEEEE SSEEEEEEE  EE     B B S  BSSSSB    SS  EETTTT EE  SSS   EE  STTS  BS SSS SS    :    
ExpBur          :bbeeeebbbebebbbbbbbbbbebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebbebeeebeeebbeeeeeeeebebebee:    

queryA      1118:TV:1119
                :**:
6acd_B_1    1118:TV:1119
SecStr          :  :    
ExpBur          :be:

Protein Model on 6acd_B_1 focusing on 846-th site (TEMPLATE: 6acd )

Input Residue Numbers for Focused Sites